Lonchura striata (white-rumped munia): 110481598
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Entry
110481598 CDS
T05897
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110481598 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110481598 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
110481598 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
110481598
NCBI-ProteinID:
XP_021405997
UniProt:
A0A218V315
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Position
4:20622940..20760826
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AA seq
580 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKAETTEVVKPVPIASAVAPKVTAT
ASVAFNKTPRPFGAVISSKVTSIPSPSSAFTPAQASAASSCAMPGVHANAKPNAEPWPPV
LGAPKPAVPVPRQHGAAPSASAADGAQDAAEGPQRGGRENQGESKQQNGPPRKHIVDTYT
EFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPENEAGKKTND
SLEASQPAPVRSVPACQDNMDVRPAPANTTPAAVLKPAAPLGSAKGWQPPNQAAPVSGWT
SNSIKSPGTTAPSEKAAITPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALG
KSWHPEEFNCAHCKTSMAYIGFVEEKGMLYCEVCYEKFFAPECSKCQRKILGEVINALKQ
TWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALG
HSWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccggctccctggggtttcaggcttcaaggg
ggcaaggatttcaatgtgcctctgtctatctctcggcttaatgatggtggcaaggcagcc
caggcacacgtggggattggtgatgtggttctcaccattgatgggataagcacggatggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgatcattttcatgtgacaaaggcagaaact
accgaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccaca
gccagcgtggctttcaataagacaccgaggccgtttggggctgtaatctcctccaaggtc
acctccatcccgtcaccgtcctccgccttcacgccggcgcaggcgtcggccgcatcctcg
tgtgccatgcctggagtgcatgctaacgccaagcctaacgctgagccgtggccgcctgtg
ctgggcgctcctaaacctgcagttcctgtcccacggcagcacggtgccgccccgagcgcc
tcggccgccgacggcgcccaggacgcagctgaggggccgcaacgaggaggcagagagaac
cagggggagagtaaacagcaaaatggccccccgcggaagcacatcgtggacacctacacg
gagttctaccacacgcccacccacagcgacgccagcaagaagcggctgatcgaggacacc
gaggactggcacccccgcacaggcaccacccagtcccgctccttccgcatcctcgcccaa
atcactggcacggatcacatgaaagaaccagaaaatgaagctgggaagaagactaatgat
tccctggaagcttcccagcctgctccggtgaggagcgtacctgcctgccaggacaacatg
gatgtgagacctgctcctgccaacaccacacctgccgcagtcctcaagccagcagcaccc
ctgggttctgccaagggctggcagcctccaaaccaagcagctcctgtcagtggatggaca
tccaacagtattaaatcacctggaacaactgccccgagtgaaaaagctgcaataacacct
cagctaaatgagcaagacacgttggttcagcgggcggagcatattccagcggggaagcgc
actcccatgtgtgcgcactgtaaccaggtcatcagaggacccttcttggtggctttggga
aagtcatggcatccagaggagtttaattgtgcccactgcaaaacctccatggcatacata
ggatttgtggaagagaaagggatgctgtattgtgaggtctgctatgagaagttctttgcc
cctgagtgttcaaagtgccagaggaagatccttggggaagtaataaatgctttgaaacaa
acttggcatgtttcctgcttcgtgtgtgtggcctgtcacaaccccatccgcaataatgtt
ttccacttagaagatggtgatccctactgtgagacggattactatgccctctttggtacg
atgtgccatggctgtgaattccccatcgaagctggagacaggtttcttgaagccctgggc
cactcttggcatgacacttgctttgtatgctccgtatgtagtgacagtttggagggccag
actttcttctccaagaaggacaagccactgtgcaagaaacacgcccactctatcaacatc
tga
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