Lonchura striata (white-rumped munia): 110481899
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Entry
110481899 CDS
T05897
Symbol
PPP2R2C
Name
(RefSeq) protein phosphatase 2, regulatory subunit B, gamma isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03015
mRNA surveillance pathway
lsr04261
Adrenergic signaling in cardiomyocytes
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110481899 (PPP2R2C)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110481899 (PPP2R2C)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
110481899 (PPP2R2C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110481899 (PPP2R2C)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110481899 (PPP2R2C)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110481899 (PPP2R2C)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110481899 (PPP2R2C)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110481899 (PPP2R2C)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110481899 (PPP2R2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
110481899
NCBI-ProteinID:
XP_021406432
LinkDB
All DBs
Position
4:complement(59686803..59878833)
Genome browser
AA seq
459 aa
AA seq
DB search
METERTGIARAAAMQASPHCPTNVPQPSSEEVTSGADIISTVEFNHTGELLATGDKGGRV
VIFQREPESKNEPYNQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAHSLL
STNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVTPRRIF
ANGHTYHVNSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITAS
EFHPHHCNLFVYSSSKGSLRLCDMRASALCDKHSKLYEEPEDPSNRSFFSEIISSVSDVK
FSHSGRYMLTRDYLTVKVWDLNMETKPVETYQVHDYLRSKLCSLYENDCIFDKFECAWNG
SDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAILKPRRVCVGGKRRKDDISVDS
LDFTKKILHTAWHPTENIIAIAATNNLYIFQDKVNSEMH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaaaggacaggtatagcaagggcagcagcaatgcaagcttccccacactgt
cctaccaatgttcctcagcccagttctgaagaagtcacttctggagctgatattatttct
acagttgagttcaaccacactggagaactgctggctactggtgacaaagggggccgagtt
gttatattccaaagggaacctgagagtaaaaatgagccttacaatcagggggagtacaat
gtttacagcactttccagagccatgaacctgaatttgattatttgaagagcttggagata
gaagaaaaaataaacaagatcaagtggttaccacagcaaaatgcagctcactcacttcta
tcaacaaatgataaaacaatcaaattgtggaaaattacggaaagagataagagaccagag
gggtacaacttaaaagatgaagaaggaaaacttaaagatctttctacagtaacatctctg
caggtgcctgttttgaaacccatggatttgatggtagaagtcactcccaggagaatcttt
gctaatggtcacacttatcatgtcaactcaatatcagtcaacagtgactgtgagacatac
atgtcagcggatgatctcaggattaacctctggcatttagccatcacagataggagcttc
aacattgtagatataaagccagccaatatggaggacctgacagaagtgattacagcctct
gagttccatccccaccactgcaatctctttgtctacagcagcagcaaaggatccctgaga
ctctgcgacatgagggcatcagctctctgtgacaaacattccaagctttatgaagaacca
gaagaccccagtaacagatcatttttttcagaaattatctcttcagtgtcagatgtcaaa
ttcagccacagcggtagatacatgcttacaagagattacctcactgtcaaggtttgggat
ctgaacatggaaacaaagcctgtagaaacgtaccaggtccacgattaccttagaagcaag
ttatgttccctctatgaaaatgactgcatctttgacaagtttgaatgtgcatggaatgga
tcagacagtgtgataatgacaggtgcgtataacaacttctttcgaatgtttgaccgcaac
accaagcgggatgttaccctggaggcttcccgggagagcagcaaaccacgagccatcctc
aagccccggagagtctgcgttggaggcaagaggaggaaagatgacatcagtgttgacagt
ttggactttactaagaagatcttgcacacagcatggcacccaaccgagaatatcattgct
atagcagcgacaaacaatctgtacatatttcaggataaagtgaactcagaaatgcactag
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