Lonchura striata (white-rumped munia): 110481917
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Entry
110481917 CDS
T05897
Name
(RefSeq) transcription intermediary factor 1-beta-like
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110481917
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110481917
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110481917
Protein kinases [BR:
lsr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
110481917
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110481917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
PHD
ANCHR-like_BBOX
Collagen
zf-C2H2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110481917
NCBI-ProteinID:
XP_031363557
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MTSPREGAPHQCGHCHKSFSSRKNYTKHMFIHSGERGDTAGNRGDTAGHRGDTAGHRGDT
AGPLLSRRLVAQEVTGGRGVTVSPLCPLCVPTAFECPVCHQPCPLGDIMENFFLQDSGVG
TAPAGRQSCTSCEDNAAATSFCLECAEPLCDTCVEAHQRVRYTREHSVQPLGSPAVPAVA
AAAALPGPCPLHPLQPLSQFCSACERLTCGECHRGPHRAHPSQPLDEAVRQQRSVLAALL
QRLADKHAAVQRCAKELRGHPQAVVGSGGQGPPQLSPPPPLSPLPQLSPPRLEPVATESP
ELAPSPENGVTGGRTRNPGSSPREEKFVKTLLIKRRGPPGAQDSPRLPKEPRVSLERLEL
DLELDPAQPPVFRIFPGPSEQEFSLIVIEQGTAGTEGTEGTEGTEGTAATAATEGTEGTA
GTVQPHGALLVKPGVPGVPGVSCCRVCGQAGAVVMCDRCQRCFHLHCHLPALQDVPSPEW
TCLLCQELPPPLPEPQPEPGPPLKLSPQDQQRCEFVLLELLCHEPCRPLQRLCSSPPRAN
KDGGAHEEHGGAHREKGLKPRPLHVIGCREPGRAEVFRK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaccgcgggaaggggcgccgcaccagtgcgggcactgccacaagagcttcagc
tcccgcaagaactacaccaagcacatgttcatccactcaggtgagcgcggcgacacggct
gggaaccgcggtgacacggctgggcaccgcggggacacggctgggcaccgcggggacacg
gctggcccgctcctgagccggcgtttggtggcacaggaggtgacaggaggccgtggggtg
actgtgtcccctctgtgtcccctctgtgtccccacagccttcgagtgccccgtgtgccac
cagccgtgtcccctgggtgacatcatggagaacttcttcctgcaggacagcggggtgggc
acggcgccggccggcaggcagagctgcaccagctgcgaggacaacgcggcggccaccagc
ttctgcctggagtgcgccgagccgctgtgcgacacctgcgtggaggcccaccagagggtc
aggtacacccgggagcacagcgtgcagcccctgggctctccggccgttcccgccgttgcg
gcggctgcggcgctgccggggccgtgcccgctgcacccgttgcagccgctgtcgcagttc
tgcagcgcctgcgagcgcctgacctgcggcgagtgccaccggggcccgcaccgcgcccac
ccctcgcagcctctggacgaggccgtccggcagcagcgctcggtgctggcggcgctgctg
cagcgcctggccgacaaacacgcggcggtgcagcgctgcgccaaggagctgcgcggccac
ccccaggccgtggtgggcagcgggggacagggtcccccccaactgtcacctcctcccccg
ctgtcacctctcccccagctgtcacctccccgcctggagccagtggccaccgagagcccc
gagctggcccccagccctgaaaacggcgtcaccggagggaggacgaggaaccccggcagt
tccccccgggaggagaagttcgttaagacactgctcattaagcggaggggcccccccggg
gcccaggacagcccccggctccccaaggagccgcgggtgagcctggagcgcctggagctg
gacctggagctggacccggcgcagccgcccgtgttccgcatcttcccggggccctcggag
caggagttcagcctcatcgtcatcgagcaggggacagcggggacagaggggacagagggc
accgagggcaccgaggggacagcggcgacagcggcgacagaagggacagaagggacagcg
ggcacggtgcagccacatggagccctccttgtcaagccaggggtcccgggcgtcccgggg
gtctcgtgctgccgcgtgtgcggccaggccggggccgtggtgatgtgcgaccgctgccag
cgctgcttccacctgcactgccacctgcccgcgctgcaggacgtgcccagccccgagtgg
acgtgtttgctgtgccaggagctgcccccgcccctgccggagccgcagccggagccaggc
ccccccctcaagctgagcccccaggaccagcagcgctgcgagttcgtcctgctggagctg
ctgtgccacgagccctgccggcccctgcagcgcctctgcagctccccgccccgggccaac
aaagatggcggcgcccacgaggaacatggcggcgcccaccgggagaaagggctcaagccc
cgccccctgcacgtgattggctgccgggagccggggcgagccgaagtgttccggaaatag
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