Lonchura striata (white-rumped munia): 110481947
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Entry
110481947 CDS
T05897
Symbol
CUX1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110481947 (CUX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
110481947 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
110481947
NCBI-ProteinID:
XP_021406492
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All DBs
Position
19:4658049..4927992
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AA seq
1534 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDTTATILANQQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRTLQSENATLRITNSDLSGS
ARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPS
LPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYSTNSISSQSPLQQSPDV
NGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRR
NGSEGNITTRIRTAESGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSI
LQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSS
VTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQ
HERRNAALPEDIKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSEL
SMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEK
LAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVL
PAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQ
QPCPAIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRV
KEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV
EKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEE
KEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQ
AGSSDSPSARSSRAAHSSEGDSCDGVDTEGPPDGKPSGPEADEFSSAAAKSQGGPAEPAF
EAGEEALRGARPSERAEPESLEDTDDEGRLRAPRQSSPPAPRRPGDAPETLPNSATEGDA
STSAASTSVLTGESSYKSKESSEKISGVPSTSSTPAAGSQKANSLQSLFSFSEAASSRNT
RDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagggagctcgataccacagcaacaatattggcgaaccagcaagatgaaagtgagcag
tccaggaaaaaacttattgagcaaagtcgtgagttcaagaaaaacactccagaggacctg
cgcaaacaggtagctccgttactgaagagtttccagggagagattgatgcattgggcaaa
agaagcaaagaagcagaggcagccttcttgaatgtttataagagattaattgatgttcca
gatccggttccagccttggatttaggacagcagcttcagctgaaggttcaacgcatgcac
gatattgaaacagaaaaccagaaacttagggaaactctggaggaatacaataaagaattc
gccgaggtgaaaaatcaggaggttacaataaaagcacttaaggagaaaatccgagaatat
gaacagaccctgaagaaccaagcggagaacatagcccttgaaaaggaacaaaagttacaa
aatgattttgcggagaaggagagaaaattgcaggagacccagatgtcgacagcctcgaag
ctggaggaagccgaacacaaagttcaagctctgcaaacagccttggaaaaaaccaggaca
gagctatttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgatgaaatc
gagatgatcatgacagaccttgaaagagcgaatcagagggcagaggtggctcagagagag
gcagagaccttaagggagcagctctcatcagctaacaaatctctccagcttgctacgcag
atccagaaggcacctgatgtggagcaggccatcgaggtgctgactcgctccagcctggaa
gtggagctggctgccaaggagcgcgagatcgcccagctcgtcgaagacgtccagaggctc
cagggcagcctcaccaagctgagggagaactccagcagccaaatctcccagctggagcag
cagctgacagccaagaacagcacactcaaacaactggaagaaaaactgaaaggacaggct
gattatgaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccatct
gaaagctctggtgcacaggatgcatccaagccgctggaggtgctgctgctggagaagaac
cgcacgctgcagtcggagaacgccacgctgcgcatcaccaacagcgacctgagcgggtca
gccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcc
cctccttcccagttgctccgcaacgcgggggagcaggcttccaatactaatggtacacac
cagttctcaccaacgggtttaagtcaagactttttcagctcatccttggcgagccccagc
ttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatg
cagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgatttttccaaca
ggtccatacagcacaaactccatatcttcccaaagtccattacaacaaagcccggatgta
aatggcatggccccatctcccagccagtcagaaagtgctgggagcatctccgaaggcgag
gagatagacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatatt
ggacagcggatatttggacattatgtgttgggactgtcacaagggtctgtgagtgagatc
ctggcccggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataag
atgaagcagttcctgtcggacgagcagaacatcctggctcttcgcagcatccagggcaga
caaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaaga
aatgggtctgaaggtaacataaccacacgaatccgaaccgcagagtctggctctgatgaa
gccatcaaatccattctcgaacaagccaaaagggagctgcaagtacagaaaacagctgag
ccggctcagccgccttctgcctctagcagtggcaattctgatgatgcaattcgatccatt
ctgcaacaagcccgacgggaaatggaggcacagcaggctgcccttgaacctgccttaaaa
acaccacctctatctcaagctgacatttctatcctgtcccccaaactagtgtctacacct
gcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacattcatct
gtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggagcctcag
gaggcacctgttttagagcttcatggaataagtgattctgcccagggtatgttgaggcat
gttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatactgtgcag
catgagagaagaaatgcagctcttcccgaagatataaaagttgaggaagccagtggtgga
aaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggaccgtcttct
tccgagtattggaaagagtggccaaacgcggaatctccgtactcgcagagttctgaattg
agcatgactggggcgagtcgcagtgagacaccacagaatagccccctcccttcatcccct
atcgtgtccttgtccaagccatccaaaccttcggttcctccactgacacccgagcagtat
gagatttatatgtaccaggaggtggatacgatagagctaacgcggcaggtcaaggaaaag
ctagcaaagaatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaa
ggaagtgtcagtgacatgctctccaggccaaagccatggagcaaattgacccaaaaaggc
cgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctg
cctgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacaggattcc
ctacagcagggatgtgcaagctcagaaagtactccaaagacttctgccagttgcagtcct
gctcctgagtctcccatgagttccagtgaatcagtgaaaagcctgactgagttggtacag
cagccctgccccgccatagagacgagtaaggatggcaaatcccaggaatccagtgagcca
cctgcttctgaatcccaatccacgacccctctgccactctcaggccactctgcactcagc
atccaagaactggtggccatgtcccctgagctggacacctatggcatcaccaagagggtc
aaggaagtgctcacggacaacaatcttggtcagcgtttgttcggggagacaatcctgggg
ctgacacaaggctctgtctcagacctgctggctcgccccaagccctggcacaagctgagt
ctgaagggaagggagccctttgtccgcatgcagctgtggctcaacgatcccaacaacgtg
gagaagctgatggatatgaagcgcatggagaaaaaagcctacatgaagcggaggcacagc
tccgtcagcgacagccagtcctgtgagtcctcgtccgctggcatcgactacagccagggc
gccagcccccagccccagcaccagctcaagaagccccgggtggtgctggcaccagaggag
aaagaagctctcaaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgag
gaactcgccacacagctcaacttgaaaaccagcaccgtgatcaactggttccacaattac
aggtcgcgcatccgccgggagctgttcatcgaggagatccaggccgggagccagagccag
gccgggtcgagcgactccccttcggccaggagcagcagggcggcgcacagctccgagggg
gacagctgcgacggcgtggacacggagggccctcccgacgggaagcccagcggcccggag
gcggacgagttcagcagcgcggccgccaagtctcagggagggcccgccgagccggcgttc
gaggcgggggaagaggcactgcgaggcgcccggccttcggagagagcggagcccgagagc
ctggaggacaccgacgacgagggccggctccgagcgccgcgccagagctccccgccggcg
ccgcggcgcccaggagacgctccggagacactgccaaactctgccacggaaggggatgcc
tctacctcagccgcctccacctcagtccttacgggggagagctcctacaagtcaaaagaa
agttcagagaaaatctccggtgtgccaagtacgagctcgacgccggccgcaggctcgcag
aaagccaactccctgcagagcttgttcagcttctcggaggcggcgagctccaggaacacg
cgagacagctccctgaggaaaaagaaagcggccaacttgaacaacatcatccaccgcttg
gagaaggccgccagtcgggaagaggccgtcgagtgggagttttga
DBGET
integrated database retrieval system
