Lonchura striata (white-rumped munia): 110481962
Help
Entry
110481962 CDS
T05897
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110481962 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110481962 (SCARF1)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
110481962 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110481962
NCBI-ProteinID:
XP_021406515
LinkDB
All DBs
Position
19:complement(6358867..6363872)
Genome browser
AA seq
872 aa
AA seq
DB search
MESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGPACCPGWRQDGRACTVAVCEGEDA
CREGEVCLKPGLCRCKPGFFGADCSSRCPEQYWGHDCKRSCPCHPNGRCDPVSGHCSCDP
NHWGGLCQFPCQCGPHGRCDPLTGACHCEPGWWAPNCRKQCQCNPSTSHCDPLTGLCRCL
PGWWGRRCSFKCSCNVSPCAQETGKCECLPGFWGPACQRRCDCGHGSCSPASGHCTCEPG
YQGRSCREPCPAGKYGSQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFH
GDGCLQPCPRCQHGEPCDPQTGSCLRCDPGWMGPSCNNSCPVGTFGDGCQFLCPECVSGS
CDPVTGVCICQAGYWGDSCNDTCPEGYFGVNCSSPCQCSRGTCDPVQGDCVLSLKDHGTL
AAAILVPLLLLLLCVACCCCGAGSADARDRAAVPDDDVVARMKHHVQGVLANLSALMPCF
NLGTSKLPKVTVSHHDMEIPYNPSFIEPPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPPGQALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPSRKPKAPWGPSRLTPPPGDAAAEPPGERPASDCYENPEPLSKGDESHRPSPRATP
GGRRRMVSSTRHVAQRVEALEAAAKSGSWEAKGKEANVTTIYMMVGTAGQDPRAEGTGEG
RVQAVLKRLGSLQRGKWAAKEEPKVRRSMEAIQKPPRRALAQRRDSENSCKQRESVPGAP
AESAPGKQQHPAAKRLSLLLASLSSKNTGAQDGASETLGATEKGKSPELVGSLERKGQAA
AEEEPKYENVAGSGADSPSGPGKELPAAPAAT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctggaccctgagggcaggaacgtctgcaggttcccggccggcccggcgtgctgt
cccggctggaggcaggacgggagggcgtgcacggtcgccgtgtgcgagggagaggacgcc
tgcagggagggcgaggtgtgcctgaaacccgggctgtgccgctgcaaacccggcttcttc
ggagcagactgcagctcccgctgccccgagcagtactggggccacgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgaccccgtgagcggccactgctcctgcgacccc
aaccactggggagggctctgccagttcccctgccagtgcggcccccacggccgctgcgac
cccctgaccggcgcctgccactgcgagccgggctggtgggcacccaactgcaggaagcaa
tgccagtgcaacccctccacctcgcactgcgaccccctgaccgggctgtgccgctgcctg
ccgggctggtggggcaggaggtgcagcttcaagtgctcctgcaacgtgtcgccctgcgcg
caggagacgggcaagtgcgagtgcctgcccggcttttggggaccggcgtgccagcggcgc
tgcgactgcgggcacggctcctgcagtcctgccagcggccactgcacctgcgagcccggc
taccagggcaggagctgccgggagccctgtccggcagggaaatacggatctcagtgcgtg
cacagctgtgggagctgcaagcgcagccagccctgctcacccgtggatggtttctgcctg
gcctgccagcccggctggaacgggaccctctgcaaggatccctgtgctcctggattccac
ggggatggctgcctccagccgtgtccccgctgccagcacggggagccctgtgacccccag
accgggtcctgcctgcgctgtgaccccggctggatgggacccagctgcaacaactcctgc
cccgtgggcacctttggcgatggctgccagttcctctgccctgagtgtgtttcggggagc
tgtgaccccgtgacaggagtttgtatctgccaggcaggctactggggagacagctgcaac
gacacctgtcctgaggggtattttggagtgaattgttcctcaccctgccagtgctcccgg
ggaacctgcgaccccgtgcagggtgactgtgtgctgagtttgaaggaccatggaaccctt
gcagctgccatccttgtccctctcctgctgctgctgctctgtgttgcctgctgctgctgt
ggtgctggctcagcagatgccagagacagggcggctgtgccagacgatgatgtggtggcc
aggatgaagcaccatgtgcagggggtgttggccaacctcagtgctctcatgccctgcttt
aacctggggacctcgaaacttcccaaagtcacagtttcccatcacgacatggaaatcccc
tacaaccccagttttatcgagccaccatcgtctgcgtgggtttcagacagctccttctcc
tcctttgacaccgacaacgagggaccggagtactccgtccctcccagagaaggcatcccg
ctgctgggcggggctgagctgcaggacggagcatcccctcccggccaggcgctcccggat
ccctccgccttcgactccgaggatgtctcgcagcccttcgccatcccccgcacctccagc
atcgccaaggccaagcgaccctctgtgtccttcgccgaggggacaaaattcggggcggcc
gagacgcccagccccagcaggaagcccaaggccccgtggggcccatccaggctgacccca
ccgccgggggatgcggcggccgagccccccggcgagcgccccgccagcgactgctacgag
aaccccgagcccctcagcaagggggacgaaagccaccggccatcgccacgggccacgccg
gggggacgccgcaggatggtgtccagcaccaggcatgtggcccagagagtggaggcgctg
gaagcagctgcgaaatccggcagctgggaagccaaggggaaggaagccaatgtcaccacc
atctacatgatggtgggaacggccgggcaggaccccagggcggaggggactggcgaggga
cgggtccaggctgtgctgaagcgtctgggcagcttgcagaggggcaagtgggctgcgaag
gaggagcccaaggtgaggaggagcatggaggccatccagaaacctcctcgccgggctctg
gcgcagcgcagggactcggagaacagctgcaagcagagggagagcgtgccgggggctcct
gccgagtcagcccctggcaagcagcagcatcccgctgccaagagactgtccctcctcctg
gcatctctctcgtcgaaaaacaccggtgcccaggacggggccagcgaaaccctaggtgcc
acagagaagggcaaaagcccggagttagtcggcagcctcgaaaggaagggtcaggctgcc
gcggaggaagagccgaaatacgagaacgtggccggcagcggtgctgattcgccctccggc
cccggcaaggagctgccggccgcccctgcggccacctga
DBGET
integrated database retrieval system
