Lonchura striata (white-rumped munia): 110481995
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Entry
110481995 CDS
T05897
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110481995 (TMF1)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110481995 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
Motif
Other DBs
NCBI-GeneID:
110481995
NCBI-ProteinID:
XP_021406566
UniProt:
A0A218UWC3
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All DBs
Position
12:complement(15968208..15983771)
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AA seq
1105 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEETPWPDAVIPDYGDGTNSLISGGWDTS
SWGLNSNTEPQNQPVSPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKETQHSTQLEGPATAEAEVKDSVDVLDLKSLDIPKEKLEENPVLKSDA
QHEASTNEITDKKVSALNFEEPEDSPTEKSSVRGDGAAVPPEGTSQPLGAGTKDLSLEGK
ERKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHLMQ
TSFQLLSTSACADYNRLDDFQKMTESCGSSDAFERIDSFSVQSLDSRSVSEINSDDELSG
RASASASAAASPSVPKTETVDALKNKSENLNDAPVLHAEEAEMEESGRSATPVNSEQPDV
VLVAAVQTIEEQVVKEEAEPQQDAGEQLVEEDIEKQELKKMIDSLTEKLEKREVQLLSTS
KERARLEEAYDNLKDEMFRMKEESSSLSSLKEEFAQRIADAEKKLQLACKERDAAKKEVK
TVKEELATRLNTNETAELLKEKEEQIKGLMEEGEKLSKQQLQNSNIIKKLRAKEKERENI
NTKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEKDLTKLQAEVEEL
EERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQEEARQ
QQEALAIQVADLRLALQRAEQQAARKEDYLRQEIGELQQRLQEAESRNQELSQSVTSATR
PLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELLANKIQMS
SSESQNSLLRQENTRLQAQLEVERNKLKKMENENSRYEVELEGLKDEYAKTLEDAKKEKA
LLATQLEMEKMKVEQERKKAVLVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAGL
QTSFLSQDDPHDHSFGPIATSGSNLYDAIRMGSGSSIIENLQSQLKLREGEISHLQLEIG
NLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRTQLKDLDQRYNTILQMYGEKAEEAEE
LRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctctccagcttcgccaagcaggcgctgtcgcaggcg
cagaaatccatcgaccgggtgctggacatccaggccgaggagaccccctggcccgacgcc
gtcatccccgactacggtgacgggacaaattctctcataagtggaggatgggacacatct
tcctggggcttgaactcaaatacagaaccccagaatcagccagtatcacccacagccatc
acaaagccggtgaggaggacggtagtggatgaatccgaaaacttcttcagtgcctttctc
tccccaacagacgttcaaagtatacagaaaaacccagtggtgtccaaacctccagccaaa
tcacagcgacccaaagaggaggtgaaaagcactttaaaggagactcaacactccactcag
ctggaagggccagcgacagcagaggcagaggtgaaggattccgtagatgtcctggacttg
aaaagccttgatattcccaaggagaaattagaagagaatcctgtgcttaaatctgatgcc
cagcatgaagcaagcacaaatgaaattactgacaaaaaggtgtctgctctaaattttgaa
gaacctgaagattctcctactgaaaaatccagtgtaagaggggatggagcagcagttcca
cccgagggcacttctcaaccccttggagcaggcacgaaagatctgagtttggaagggaag
gagagaaagactgaggacagacaaagcaataccccatcacctcccatcagcaccttctcc
tcaggcacttccacaactagtgatattgaagttctggaccacgaaagtgtgataagtgag
agctcagtaagttccagacaagaagctgcagattccaaatccagccttcacctcatgcag
acgtcgttccaactcttatccacgtctgcatgtgcggattacaatcgcttagatgacttc
cagaaaatgactgagagctgtggctcctcggatgcttttgaaagaattgattcattcagt
gtgcagtccttggatagcaggagtgtcagtgaaatcaattcagatgatgagttatcaggc
agggcttctgcttcagcgtctgctgctgccagtccttccgtgccaaagacagaaacggtt
gacgccctgaaaaataagtctgaaaacttaaatgatgctcctgtgttacatgctgaggaa
gctgagatggaagagagtgggagaagtgcaacccctgttaattctgagcagccagatgtt
gttttggttgctgctgtgcaaactattgaagaacaggttgtgaaggaggaggccgagccc
cagcaggatgctggggaacaattggtagaagaggacattgaaaagcaagagcttaaaaag
atgattgattcattaactgagaagctggagaagagggaagtacagttattaagcacaagt
aaagaaagggctcgcttggaagaagcttatgataacctcaaagatgaaatgtttagaatg
aaagaagagagcagcagcctttcatctcttaaagaggagtttgctcagcgaattgcagat
gctgagaaaaagctccaactagcctgcaaagagagagatgcagctaaaaaggaagtaaag
actgttaaagaggaattggctactagacttaataccaatgaaactgctgaattattgaaa
gaaaaagaagagcaaatcaaaggattaatggaggaaggagaaaagctttccaaacagcag
ctgcagaattccaacattattaagaaattaagagccaaagagaaagagagagaaaatatt
aacacaaaacagaacaaaaagattaaggaattggaagaggagttgcagcatttaaaacag
gtgcttgatggcaaggaagaccttgagaagcagcatcgagacagcattaaacaactgaac
agtgttgtggagagacaagaaaaggaccttactaaacttcaggcagaagtggaggaactt
gaagaaaggaacaggagtgtgcaggcagcactcgacagcgcatacaaggaacttgcagat
cttcataaagctaatgctacaaaggacagtgaggctcaggaagcagccctgagtcgggag
atgaaggcaaaggaagagcttgggttagcactggaaaaggctcaggaggaggctcggcag
cagcaggaagctttggccattcaggtagcagacctgaggctggcactgcaacgtgcagag
cagcaggcagcaagaaaagaagattatttacggcaggaaattggtgaactacaacagaga
ctccaagaagcagagagcaggaaccaagagctgagccaaagtgtcacctctgctacgcgg
ccccttctgcggcagatagagaacctgcaggccacgctgggagcacagacctctgcctgg
gagaaactggaaaagaacctttctgacaggctgggtgagtctcaaacacttctggcagca
gctgctgagagagaacgggctgctacagaggaacttcttgctaataaaattcaaatgtct
tcttctgaatctcaaaatagtcttttaaggcaagaaaatacccggcttcaggctcagctg
gaagtggagagaaacaaattgaagaaaatggaaaatgagaacagcaggtatgaggttgaa
ctagaagggctcaaagatgagtatgcaaaaaccctggaagatgcaaagaaagaaaaggca
ctgctggctactcagttagaaatggagaagatgaaggttgaacaggagagaaagaaggct
gttcttgtccaagaagcagcaaaggagaaggaccgaaagtcattcacagttgaaactgta
tcaagtacaccatcaatgtcccgctccagttccataagtggggtggacatggcaggtctt
cagacctctttcctctctcaggatgatcctcatgatcactcgtttggaccaatagctacc
agtggaagcaatctctatgatgcaataaggatgggatcgggttcaagtataattgaaaac
cttcagtcacagctaaaactaagagaaggagaaatttcacatctacagctggaaattgga
aacctggagaaaactcgatcaataatggcagaagagctggttaaattaacaaatcaaaat
gatgaacttgaagaaaaagtgaaggaaatacccaaactacgcacacagttaaaggatttg
gatcagaggtacaacaccattctccagatgtatggggagaaggcagaggaggctgaggag
ctccgactggatctggaagatgtgaaaaacatgtacaagactcagatagatgaacttttg
aaacaaagacaaaattaa
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