Lonchura striata (white-rumped munia): 110482015
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Entry
110482015 CDS
T05897
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110482015 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
110482015 (SMYD4)
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
zf-MYND
SET
TPR_19
TPR_10
TPR_NPHP3
TPR_7
TPR_11
TPR_6
BA_2335-like
Motif
Other DBs
NCBI-GeneID:
110482015
NCBI-ProteinID:
XP_021406588
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Position
19:complement(6444899..6451297)
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AA seq
797 aa
AA seq
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MALPVAEWRGRTARLWAALDSALRERLAAASLHDAVRLGCDLLRTKEEEEAALVQLCHRA
ATDKKPEAASRYREQGNQEFKQGHYQAALRLYSKAASHELPGSPELSVCFANRSAALLHL
GHFEVCLEDIARAESHGYPDRLLPKVLLRKAECLLRLGRLQDAQESLRVLESKFALDGVM
TTNLARLKKLSQLKVKLGEKERCPEPAQEAHGGIQGEPEIWEENNRISGASSSLSLGFDA
ERGRHLLASQDIVPGQSLVKEEAFVSVLCPGESLPLQDGDTAWDTRATNADLYCHRCLRQ
LLASVPCQGCSYAKYCSQDCADVAWQQYHRTECSLGALLLTLGVFCHVALRTVLLAGFAE
VSRLVAWSHRGDKSLQCPEASCKPLGEAADAGAGSRGVPGCDSSGQYQSSYQALFHLLPH
TEQHSPEHKFLCSLSVVAICKQLQAAGLEAAVLSQESPQQWSKPKPCENTSGELSPELKT
VAEAMLRHVLQLQCNAQAITVMQELGPGDGDVVDKKPVRLATAFFPVLSLLNHSCCPNTS
VSFSGTAATVRASQPISSGQEVLHCYGPHWCRMRVAERQQLLSQYFFNCRCPACLEELES
GVKSVVSIRNSFCCPKCQAQMQGEEDTLCCSNEACATSASRDHLSGRLQDLQQQIKKGLG
MLRVGKADQAIKMLLKCQMDAGTFLSPEHLLMGEMEDHLAQVYATLGKWQEAARHLKKSI
EIVEMHHGPSSVETGHELFKLAQILFNGFAVSEALSTIQRAEGILSVHFGPQNAQIQELQ
EMKACLSELPINILQRT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccggtggcggagtggcgcggccgcaccgcccggctctgggccgcgctggac
tcggcgctgagggagcggctggcggcggcttcgcttcacgacgcggtgcggttgggttgc
gatctgctccggaccaaggaggaggaggaggcagccctggtgcagctgtgccaccgggca
gccacggacaagaagccagaggctgcgagccggtaccgggagcagggcaaccaggaattc
aagcagggccactaccaggctgccctgaggctctactccaaggcagcatcccacgagctc
cccgggagccccgagttgtccgtgtgctttgccaaccgctcggccgccctcctccacctg
ggacactttgaggtttgtttggaagatattgccagggctgaaagccatggctatccagac
aggctgctgcccaaggtcctgctgcggaaagctgagtgtctgctgcgcctggggaggtta
caggatgcacaggagagcctcagagtgctggagagtaaatttgctctggatggtgtcatg
actacaaacctggcacggctaaaaaagttaagtcagctgaaggttaaattaggtgagaaa
gagaggtgtccagagcctgcacaagaagcacatggtggcattcaaggggagccagaaatc
tgggaagagaacaacaggatttcaggtgcatcttcatccctgagcttgggttttgatgca
gagagaggacgtcacttgctggcctcccaggacatcgtgccaggacagagcctggtgaaa
gaggaggcctttgtgagcgtgctgtgccctggggagagccttcctctgcaggatggtgac
acagcgtgggacactcgagccaccaacgcggatctttactgccaccgctgcctgaggcag
ctcctggcctcggtgccttgccagggctgcagttatgccaagtactgcagccaggactgt
gcagacgtggcatggcagcagtaccacaggacagagtgttccctgggagcgctgctcctc
acgctgggagtcttctgccacgtggccttgaggactgtcctgctggcaggatttgcagag
gttagcaggctggtggcgtggtcccaccgtggggacaagagcctgcagtgccctgaggca
agctgcaagcctctcggtgaggcagcagatgcaggagctggtagcagaggtgtccctggt
tgtgacagcagtggtcagtaccagagctcttaccaagctctgttccaccttttaccccac
actgagcagcacagccctgagcacaagttcctctgctcgctcagtgtggtagctatatgc
aaacagctgcaagcagctggcctggaggctgctgtgctgagtcaggaatcgcctcagcag
tggtccaaaccaaagccatgtgagaacacctcaggtgaattgtccccagagctgaagact
gtggcagaagcaatgctgaggcacgtgttgcagctgcagtgtaatgcacaagcgatcact
gtaatgcaggagttggggcctggagatggggatgttgtagataagaagcctgtgaggctg
gcaacagccttcttccctgtcctcagcctcctgaaccactcatgctgccccaataccagc
gtgtcattcagtgggacagctgccactgtcagggcatcacagccaatctcaagtggccaa
gaggttttgcattgctatgggcctcactggtgtaggatgagggttgctgagaggcagcag
cttctcagccagtatttcttcaattgtcgctgcccggcgtgcctcgaggagttagagtct
ggtgtcaagagtgtggtgtccattagaaattcattctgctgtcccaaatgccaggcccaa
atgcagggggaagaagacactctttgctgttcaaatgaagcttgtgcaacctcagccagc
agagatcacttgtctggccgtttacaggacctccagcaacaaatcaagaaaggtttaggc
atgctgagagtcggaaaggctgatcaggctatcaaaatgctcctgaagtgtcagatggat
gctggaaccttcttgtctccagagcatttactgatgggagagatggaggatcatctggca
caggtgtatgctactcttgggaagtggcaggaagcagccagacacctgaagaagagtatt
gagattgtggaaatgcaccatgggccatcaagtgtagaaacaggccatgaacttttcaag
ctggcacaaatcctcttcaatggatttgcagtttctgaagctctgagcacgattcaaaga
gcagaggggattttgtcagtgcactttggtcctcagaatgctcagatccaggaactacaa
gagatgaaggcctgcctgtcagagcttcccataaacatccttcagaggacttaa
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