Lonchura striata (white-rumped munia): 110482018
Help
Entry
110482018 CDS
T05897
Name
(RefSeq) protein spinster homolog 3
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110482018
Transporters [BR:
lsr02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
110482018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
DUF5684
Motif
Other DBs
NCBI-GeneID:
110482018
NCBI-ProteinID:
XP_021406592
LinkDB
All DBs
Position
19:complement(3784584..3808674)
Genome browser
AA seq
498 aa
AA seq
DB search
MQAPCEHEDTSLLLQPLFEGEDYGAAAADGTPCPSVSVARNNPAKRDCLVVAVLCFGNLV
NFIDWFIVPGILLDIQKYFGLSDGKTGLLQTVFTLCYMLAAPIFGYLGDRYNRKIILGAG
IFFWSGVTLGSSFITESHYRIFVLSRGLVGIGSASYSTIAPTIIADLFEEGRRTTALSIF
YIFIPVGSGCGYMLAASMAKSTGDWHWAFRVTPCMGGLALLLLILLVPHKIQRKTAAHRA
LSISGMIGRADEKPDIHRTTKTTWCQDVGSLVKNCSFVCSSLGLTAMAFVTGALGMWMPL
FLYRAQVVQGLVPPCLQDSCNSSNSLIFGGITIGTGIVGIIAGAEAARRLRKINNKADPL
ICASSMFISALCLYIALMVAQTNILSTFIFIAFGELFLSVNWAVVTDILLYVVTPRRQST
AIALQILVSHLLGDAGSPYLVGVISNAVQARNSPSLQWSFRSMQYSFVTCAFVGVFGGGF
FLLTSFYVEEDRKEAQRL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccccctgtgaacatgaagacacaagcttgctgctccagccgctgtttgaggga
gaggattatggagctgctgcagcagatgggacaccatgtccatcagtgtccgtggcaagg
aacaacccagcaaagagggattgcctggtagttgccgtgctgtgctttgggaatttagta
aatttcattgattggttcattgtgccagggatcctgttggatatacaaaaatactttggg
ctcagtgatgggaagacaggtctactgcagacagtcttcaccttgtgttacatgctggct
gcccccatctttggctacctcggagatcgctacaacaggaagatcatccttggagctggt
attttcttctggtctggtgtgaccttggggagctccttcatcactgagtcgcattacagg
atatttgttctttcacgaggattggttggcattggctctgccagttactccactatagca
cctaccatcattgcagacctgtttgaggaaggaagaaggaccacagcattatctatcttc
tacattttcattccagtgggaagtggctgtggttatatgctggcagctagcatggcaaaa
agcacaggtgactggcactgggcattcagggtaactccttgcatgggaggactggcactg
cttctcctgattctactggtccctcacaagatccagagaaagacagcagcacacagagca
ctgagcatctctggcatgataggaagagcagatgagaagccagatatacacagaactaca
aagactacttggtgtcaagatgtgggatcacttgtcaagaactgtagttttgtctgttcc
tcactgggtctgactgccatggcctttgtcactggagccctgggaatgtggatgccactg
tttctgtacagagctcaggttgtccagggccttgtcccaccatgcctccaagactcgtgc
aattcctctaacagcctaatatttggaggcatcaccattgggacaggaatcgtgggtatt
attgctggggcagaagctgcaagacgtttaagaaagataaacaacaaagctgatcctctg
atctgtgcctcaagcatgttcatttctgccctgtgcctctacatagctctgatggtggcc
cagacaaatatcctttccacttttatttttattgcatttggagaactgtttttgtctgta
aactgggctgttgtgacagacatactgctgtacgtggtgacgccgaggcgacagtccaca
gccatcgccctgcagattttggtgagccatttgctgggagatgcagggagcccatacctc
gttggggttatctccaatgctgtccaggccaggaacagcccatcgctgcagtggagtttc
cggagcatgcagtacagctttgtcacctgtgcttttgttggggtctttggaggaggcttt
ttcctcctcacatctttctacgtcgaggaagatcggaaagaagcacagaggctctga
DBGET
integrated database retrieval system
