Lonchura striata (white-rumped munia): 110482087
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Entry
110482087 CDS
T05897
Symbol
HIC1
Name
(RefSeq) hypermethylated in cancer 1 protein
KO
K24384
hypermethylated in cancer protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110482087 (HIC1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
110482087 (HIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_3rep
zf-C2H2_11
Zf-C2H2_ZNF451_2nd
zf-C2H2_15
zf-Di19
zf-UBP
zf-C2H2_16
Zf-C2H2_ZNF451
Zn_ribbon_8
TRASH_HVO_1752_C
Motif
Other DBs
NCBI-GeneID:
110482087
NCBI-ProteinID:
XP_021406704
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All DBs
Position
19:6563559..6566491
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AA seq
665 aa
AA seq
DB search
MRVHRDLSWLAEATGRPGRRARSGMLDAMEVPSHSRQLLLQLNTQRTKGFLCDVIIVVQN
ALFRAHKNILAASSAYLKSLVVHDNLLNLDHEMVSPGIFRLILDFIYTGRLAECEPGSEQ
SLGAVLAAASYLQIPGLVALCKKKLKRSGKYCHLRGGYAPYKLGRGLRAATPVIQACYSG
TPRPVDLPPVEPAAPLNTQCGELYASAAQGAPLHPHGLCPPERHCSPPCGLDLSKKSPTG
PSAQLLPTDRLLPSEPREPSLPPRHDSPPVSAGLLGSHAAAYKDSPPGGEPGGHPHAPDP
FRSTPPCAEPPLPRADGRELMYRWMKHEPLGPYLDEGEAEKELEREEKAESPPAAPQPRY
PSVESNDLEPDNSTSEETGSSEGPSPGDALDRYCNHLGYEPESLGDNLYVCIPCGKGFPS
SEQLNAHVEAHNEEELYHKAAAEQAVPFLDKGGPGLGDILRPYRCSSCDKSYKDPATLRQ
HEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRI
HSGEKPYECQVCGGKFAQQRNLISHMKMHAAGPDGKAKLDFPDSVYAMARLTADQLGLKQ
EKAAELLSHTSHFLSDPKAMESLYPLAKFTAEHLGLSQDKAAEVLVQAPHLHTEAARTIE
RYSPP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaccgagacctcagctggctggcggaggccaccggacgcccagggcggcgg
gctcggagcgggatgctggacgccatggaggtgccgagccactcgcggcagctgctgctg
cagctgaacacgcagcgcaccaagggcttcctgtgcgacgtgatcatcgtggtgcagaac
gcgcttttccgtgcgcacaagaacatcctggccgccagcagcgcctacctcaagtcgctg
gtggtccacgacaacctgctcaacctggaccatgagatggtgagccccggcatcttccgc
ctcatcctcgacttcatctacaccggccgcctggccgagtgcgagccgggcagcgagcag
agcctgggtgctgtgctggctgccgccagctacctccagatccccggcttggtggccctt
tgcaagaagaagctgaagcgcagcggcaagtactgccacctgcgcgggggttacgcgccc
tacaagctgggccgcgggctgcgggccgccacgccggtcatccaggcttgctactcgggg
acaccgcggcccgtggacctgccgcccgtggagccggcggcgccgctcaacacgcagtgt
ggggagctgtacgcctcggccgcccagggcgccccgctgcacccccacgggctgtgcccg
cccgagcgccactgctcgccgccctgcggcctcgacctctccaagaagagccccaccggc
ccctccgcccagctcctgcccaccgaccgcctgctgcccagcgagccccgagagccctcg
ctgcccccacggcacgacagccccccggtcagcgccggcctcctgggcagccacgccgct
gcctacaaggactccccgccgggcggcgagccgggggggcacccccacgcccccgacccc
ttccgcagcacgccgccctgcgccgagcccccgctgccccgcgctgacgggcgggagctg
atgtaccgctggatgaagcacgagcccctgggcccctacctggacgagggggaggcggag
aaggagctggagcgggaggagaaggccgaatcgccacccgcggcgccgcagccccgctac
cccagcgtggagagcaacgacctggagcctgataacagcaccagcgaggagacgggcagc
agcgagggcccctcgcccggggacgcgctggaccgctactgcaaccacctgggctacgag
ccggagagcctgggcgacaacctgtacgtctgcatcccctgtggcaagggcttccccagc
tccgagcagctgaacgcccacgtggaggcccacaacgaagaggagctctatcacaaggcg
gcggccgagcaggccgtgcccttcctagacaaaggtggccccgggcttggtgacatcttg
cggccttaccgctgctcctcctgcgacaagtcctacaaggacccggccacgctgcggcag
cacgagaagacgcactggctgacgcgcccctacccctgcaccatctgcggcaagaagttc
acgcagcgcggcaccatgacccgccacatgcgcagccacctcggcctgaagcccttcgcc
tgcgacgcctgcgggatgcgcttcacccggcagtaccgcctgaccgagcacatgcgcatc
cactcgggcgagaagccctacgagtgccaggtgtgcggcgggaagttcgcccagcagcgc
aacctcatcagccacatgaagatgcacgcggccggccccgacggcaaagccaagctggac
ttccccgacagcgtctacgccatggcccggctcacggccgaccagctgggactcaagcag
gagaaggcggccgagctgctgtcccacacctcgcacttcctcagcgaccccaaggccatg
gagagcctctatcccctggccaagttcacggctgagcacctggggctgagccaggacaag
gcggccgaggtgctggtgcaggctccacacctgcacaccgaggccgcccggaccatagag
cgatactcgcccccctag
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