Lonchura striata (white-rumped munia): 110482098
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Entry
110482098 CDS
T05897
Symbol
RFFL
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110482098 (RFFL)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110482098 (RFFL)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110482098 (RFFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
zf-RING_5
zf-RING_2
Siva
Motif
Other DBs
NCBI-GeneID:
110482098
NCBI-ProteinID:
XP_021406732
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Position
19:5413355..5443770
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AA seq
359 aa
AA seq
DB search
MWASCCNWFCVDGSPEEMQPPAAARAQAYSNPGYSSFPSPTAPEHSCKACGMHFDSSSSK
HICLDCKKNFCTSCSNQPEGGPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALREIST
ELCREKEDLVFLILGQQPAITQEDQIRTNTFNTSEQQDFVTHPATNPASPTSHDESSVSA
DPISSSEAQEHQQANGHLPPSPACGTAAGNAAEEAAAEDEIQSSDSEENPVLGRKASLSD
LTSVGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYREKDLQHLVLDTDDQTG
GAGPPSTEDNLCRICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFRT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagctgctgtaactggttctgtgtggatggctcccccgaggagatgcagccg
ccggcggcagcgcgagcccaggcctattccaaccccggctacagctccttcccctctccc
actgctcctgagcacagctgcaaagcctgcgggatgcacttcgacagctcctccagcaag
cacatctgcttggactgtaagaagaatttctgcacgtcctgctcaaaccagcccgagggt
gggcccctgctctgccacctctgccagcgcttccgagccacagcttttcagcgggaggag
ctgatcaagatgaaggtgaaggatctgcgagattacctggccctccgtgagatctccaca
gagctctgtcgtgaaaaggaggacctggtattcctgatccttggccagcagcctgcaatt
acccaggaagatcagataagaacaaacacatttaataccagtgaacagcaagactttgtg
actcaccccgcaaccaacccggcctctcctacctcacacgatgagtcctcagtgtctgca
gatcccatctcaagttcagaagctcaggaacaccaacaggccaatggtcacctgcctccg
agcccagcctgtggaacagcagctgggaatgcagcagaagaagcagcagcagaggatgag
atacagtccagtgactccgaggagaacccggtgctgggcaggaaggcctccctgtccgac
ctgacgagcgtcggggacatcaacgcgctctccgtgcgccagctgaaggaaatcctcgcc
cgcaacttcgtcaactacaaaggctgctgtgagaagtgggagctgctggagagggtcact
cgcctctacagagagaaggaccttcaacatctagttttggacactgatgatcaaactggt
ggtgctgggccccccagcaccgaggacaacctgtgcaggatctgcatggatgctcccatc
gactgtgtgctgctggagtgtgggcacatggtgacgtgcaccaagtgcgggaagcgcatg
agcgagtgccccatctgccgccagtacgtcatcagggccgtgcacgtcttcaggacgtag
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