Lonchura striata (white-rumped munia): 110482293 Help Entry 110482293         CDS       T05897                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 isoform X1   KO K14311   nuclear pore complex protein Nup188 Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:lsr00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     110482293 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lsr03019]     110482293 (NUP188) Messenger RNA biogenesis [BR:lsr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      110482293 (NUP188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  110482293 NCBI-ProteinID:  XP_021407121 LinkDB All DBs Position 17:3565269..3590411 Genome browser AA seq 1737 aa AA seqDB search MAAGGLSARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIK ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQSYLQEDYRGTRDSLKTVLQDERQSQALM LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPEELLAFAKMFKEQ GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNQHI HQEMDNQLLQLGDVSHHAPVLLAWALLRHTINPEESTNIIRRMGSTAIQLNVFQYLTKLL RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP PDVISHEDGTLWRRQTPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPLSSMNHMISAEGMNAG GYGNLLMSMEQPQGEYSVTISFLNLVTTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM GIGVDTIDMVMASQSGSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT HLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGGDGSKEFSLGEWSCLQVVL ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKSLA QHVAETEGSSCASVTEYQMLISAWRMLLIISTSHADIMHLTDSAVRQELFLDVLNGTRVL LQVPMSVPCLQLGSMLCTLLLILLKQWKSELSSVDKIINSLTQILEGVLQADQQMMEKTK AKVFSALITVLQMKEMKVNDIPQYSQLVLSVCETLQDEVIALLDQTRHSLTSGDAADDKD SMETDEASRVKHKDQRDGVCVLGLHLAKELCEVDEYGDCWLQITRKVPVLPTIFAALEIS LRVKQNLHFTEASLHLLLTLARTQQGATAMAGAGVNLCICLPLLSVYQLSTNGAIQTSAS SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL ACLEEADHTVGFILQLSNFTKEWHFHLPQIMRDMQVNLCYLCQACTSLLHSRKMLQHYLQ TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFT PDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGEMDKKKE PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR NT seq 5214 nt NT seq  +upstreamnt  +downstreamnt atggcggcgggcgggctgagcgcgaggagcagcagagaattatggacaattttgctgggc agatcagctttaagagaaccagctcagattgctgcagagttgaacaagcactggcagagg ctgttagagggactgtcatactacaaaccaccgagtacgacttcagcagaaaaaattaaa gctgataaagatgtagctgctccactaaaagagttgggtctgagagtcagcaagtttttg ggtctggatgaagagcagagtgtgcagttgttacaatcttatcttcaagaggattacaga ggaacaagagactccctgaagacagttcttcaggacgagaggcagagtcaggctctgatg ctgaagcttgctgactactactacgaggagaggatctgcatcctgcgctgcgtcctccac ctgctcacctatttccaggatgagagacacccttacacagcacagtacttccagtgtgtt gaaaagttggacaaggagctcgttccgaattaccgcaaacagtttgaagcgctgtacaaa gcagaagctcctacatgggaaacacatggaaatctcatgacagaacgtcaggtttcccgg tggtttgtgcagtgccttcgggaacagtccatgctcctggaagtcatcttcctctactat gcatactttgaaatggcacctgaggagctcctggcatttgcaaagatgttcaaagagcag ggatttggcacaagacaaaccaacagacatttagtagatgaaagcatggatcaccttgta gatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactccctc catgagcgtgctttggatgacaggacagaggaacacaagttggccaacaatcagcacatc caccaggaaatggacaatcagctgctgcagttaggggatgtctcacatcatgctccagtg cttttggcctgggctctgctccgtcacaccataaacccagaggagtccacaaacatcatc aggaggatgggcagcactgctatccagctgaatgtcttccagtatctgaccaagctgctg cgatccctcagcagtgggggcaagaattgtactgccagcacagcttgtatgtgtatttat ggacttctttcctttgtcctgacatcactggaattacacacattgggcaatcagcaggat ataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctggaag acggaacctactgcaggtctgggtattatcctagacagtgtttgtggaatgttcccccat cttctcactcctctccttcagctgctccaagcccttgtgtctgataaatctactgcaaaa aaggtttacagtttcctggataaaatgtccttctatattgagctgtacaagcacaaacct ccagatgtgatctcccatgaggacggcacactgtggcgaagacagactccaaagctcctc tatcctcttggactaggtcaaacaaatctacggatacctcagggaacagtgggccaggtg atgctggatgatcgggcttacttggtacggtgggagtattcctacagcagctggactctg ttcacctgtgagattgagatgctgctccatgttgtgtcaacagcagatgtgattcagcat tgccagagggtcaagcccataattgatctggttcataaagtcatcagcactgatgtgtca atagcagattgtcttctgccaatcacatcacgaatctacatgctcctgcagaggctaaca actgtaatctcaccccctgtggatgttattgcttcttgtgtcaattgcttgacagtcctg gctgctcggatgccagccaaggtttggactgaccttcaccacacggggttcttgccattt gttgccaatccactgtccagtatgaatcacatgattagtgcagagggaatgaatgctggg ggctatgggaacctcttgatgagcatggaacagccccaaggcgagtacagtgttaccatc tccttcctgaacctggtaacaactcttgtccgggggcaacttggtagcacccagagccaa ggcctggtgccctgcattgtgtttgttctgaaggaaatgttaccaaattatcacaaatgg agatacaactctcatggagtgagagagaaaattgggtgcctaatcctgcagctgatccat gctatactgaatttatgccctgaaatggatcctcgcagcagcaatgcccccagcctgcag tccttgtgcatcttcagcctggccaacacggaggcagggcaagctgtcattaacatcatg ggaattggggtggacaccattgacatggtaatggcctcccagtccggcagtgatgagtcc caaggccagggccagctgctgatccagacagttaagctggcgttctccgttaccaacaac gtcatccggctgaagcccccgtccagcgtggtgtctcccctggagcaggcactcactcag catggtgctcatgggaacaaccttattgctgtcttggccaaatacatctaccacaagcat gaccctgcacttccacgcctggccattcagctgctcaaacgactggctacagttgctccc atgtccgtgtacgcctgcctgggcagcgatgctgctgccatccgcgacgccttcctcacc cacctgcagagcaagatcgaggacatgcgcatcaaggtcatgatcctggagttcctcacg gttgcagtggagacacaacctgggctcattgagctgttcctgaacttggaagtgaaggat ggtggtgatgggtcaaaggaattcagtctgggggagtggagttgcctccaagtggtgtta gagctgattgactccaaacagcaggagaggtactggtgccctcccctcctgcaccgtgct gccatcgccttcctgcacgcgctgtggcaggaccgtcgtgacagcgccatgctcgtgctg aggacaaagccaaagttttgggaaaatttaactaatcccctctttgggacccttcctcca ccttctgaatcatcagagctcagtgtcttggatacctgtgccttaataatgaaaatcatc tgcttggagatctactatgttgtcaagggctcactggatcagtccctgaaagacacgctg aagaatttctccaccaaaaagcgctttgcctactggtcagagtacgtgaagtcgctggcg cagcacgtggcagagaccgagggcagcagctgtgcctctgtcaccgagtatcaaatgctc atctcggcctggcggatgctgctcatcatctccacgagccatgctgatatcatgcatctg actgattctgcagttcgtcaggagttgtttctggatgtgctaaatggcaccagggttttg ctccaggttcccatgtcagtgccctgtctgcagctggggtctatgctgtgtacccttctt ctgatcctgctcaagcagtggaaaagcgagttgagttctgtggataaaatcataaactcc ttgacgcagattctggagggagtactacaggcagatcagcagatgatggagaaaaccaaa gccaaagtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaatgac atcccccagtactcccagctggtgctgagtgtgtgtgagacactccaggacgaggtcatt gctcttttggaccagactcggcacagcctgacctcgggagatgctgcagatgacaaggac agcatggagactgacgaggcctcccgagtaaagcacaaggaccagcgagatggggtgtgt gttctgggtctgcacctggctaaggagctctgtgaagtggatgaatatggagactgctgg ctacagattactaggaaagtccctgtgcttcctaccatctttgctgcactggagatcagc ctgagagttaaacaaaaccttcacttcacagaggcctcgttacatttgctgctcacctta gcaaggactcagcagggagcaacagcaatggctggagctggtgtcaacctgtgtatctgc ctgcccctcctgagtgtgtaccagctcagcacaaatggagccattcagacatctgcttca tcccggaagtccctggatgccccctcctggcccggggtctatcgcctctccatgtccctg atggaacgtcttctcaaaacactgagatacaacttcctgacagaagcactggactttgtg ggtgtccatcaagagaggatccttcagtgcctgaatgcagtacggactgtgcagagcttg gcctgtctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttcaca aaggagtggcatttccacctgccacagattatgagggacatgcaggtgaatctgtgttac ctgtgccaggcctgtacctccctcctgcacagccgtaaaatgctccagcactacctgcag acaaaaaatggcgattcccttccgtccagcgtgactccccgagtgcagcgtaatcctcag gcctcctccaaacaccccagccccgagtcagaggcagcagagcagaaggccctgctcaca gtgcagtacagcctcctcaaaatcctcagcaagtcgctcgctgccctgcgccatttcacc cctgatgtctgccagatcctccttgaccagtcactggacctggctgagtacaacgtgctc tttgtcttgagtttcaccacaccagcctttgattccgacgttgcaccttcctttgggacc ctccttgccacagtcaacgtggccctgaacatgctgggagagatggataagaagaaagaa cctttccctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctg ctcatgtttacaatggagaactgtttctacctgctcatctcccaggctgttcggtacctg cgggacccggctgtgcacccccgggacaagcagcggatgaagcaggagctcagctcggag ctgagcacgctgctctccagcctgtcccgttacttccgccggggtggtccctcttcacct gccagcggagtccttccctctccccaaggcaagtctgcctccaagctgggtccagagggg caggagcccttgttccagctggtgcaggcctttgtgcggcacgtgcagagatag

DBGET integrated database retrieval system