Lonchura striata (white-rumped munia): 110482426
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Entry
110482426 CDS
T05897
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110482426 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110482426 (ABCB1)
04147 Exosome [BR:
lsr04147
]
110482426 (ABCB1)
04090 CD molecules [BR:
lsr04090
]
110482426 (ABCB1)
Enzymes [BR:
lsr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110482426 (ABCB1)
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110482426 (ABCB1)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110482426 (ABCB1)
CD molecules [BR:
lsr04090
]
Proteins
110482426 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_15
AAA_28
AAA_29
AAA_30
G-alpha
AAA_19
AAA_14
nSTAND1
DUF815
Motif
Other DBs
NCBI-GeneID:
110482426
NCBI-ProteinID:
XP_021407324
LinkDB
All DBs
Position
2:complement(21808269..21844068)
Genome browser
AA seq
1295 aa
AA seq
DB search
MHSEDKKKYTEDGNSHEIAASSQGHELEDKEKTEKKQKKGEKPKVVSPFTLFRYSSWSDK
LLMILGTLLAVAHGSSLPFAMIIFGDMTDSFVASEDKNSTGKFSQNFTSDMLHKLEEDMT
RYAYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGELN
TRLLDDVSKINEGIGDKIGLLVQSLTTFVTGFIVGLIRGWKLTLVILAVSPVLGLSAALW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITANISMGAAFLLIYASYALAFWYGTTLILTDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYTIFNIIDNEPQIDSYSETGYKPDHIKGNLELKNVYFNYPSRPDVEILKG
LNLKIDSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGMVTIDGQDIKTLNVRYLREVIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADVIAVFEGGVITELGNHAKLLEKKGIYYKLVNMQAIEAEVPSSENYENVLPSSENYE
NVYSVKKSEFEPESEESLSRGLRRRSTRRSMKKPGEQNDSPDEEKTSPAEEVPPASFLKI
MKLNKTEWPYFVAGTLCAIINGGLQPAFAVIFSEIIGIFSETDKDVLRKQSNLYSLLFLA
LGIISFFTFFFQGFTFGKAGEILTMRLRFMAFKAMLRQDMAWFDNPKNSTGALTTRLAND
ASNVKGATGVRLALIAQNIANLGTGILISLIYVWKLTLLLLAVVPIIAVAGMIEMKMLAG
HAKKDKRELEAAGKIATEAIENIRTVVSLTLERKFELMYGEHLILPYRNSVKKAHIFGFC
FALSQAMMFFTYAGCFRFGAYLVVNDHTEYKKVFLVFSAVVFGAMALGQSSSFAPDYAKA
KISAAHLFLLFERVPSIDSYSEEGDKPETFEGNITMKDVAFNYPNRPEVKILQGLNLKVE
KGQTLALVGSSGCGKSTVVQLLERFYDPLDGEMIFDGKNAKALNIQWLRAQIGIVSQEPI
LFDCTIAENIAYGDNSREVSFEEIVSAAKQANIHSFIDSLPDKYNTRVGDKGTQLSGGQK
QRIAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNAD
KISVVQNGRVVEQGTHQQLLAEKGIYYSLVNVQSG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaagataagaagaagtataccgaagatggaaatagtcatgagatcgctgca
tccagccagggtcatgaattagaagacaaagaaaagacagagaagaagcagaagaaagga
gaaaaacctaaggtggtcagccctttcacactgtttcgatactccagctggtcagataaa
ttattaatgatactaggcactctgctggcagtagcccatggaagcagtctcccttttgca
atgataatttttggtgatatgactgatagctttgttgcatctgaagacaaaaattctaca
ggaaaattttcacagaatttcacttcagatatgcttcacaagctggaagaagatatgaca
agatatgcatactactattctggaatagcagctggtgttcttcttgctgcttatattcag
acttcattctggaccttagcagcaggtcggcaaataaagaaaattagagaaaaatttttt
catgcaattatgagacaggaaattggatggtttgatgtaaatgatgtgggagaactcaac
actcgtcttctagatgatgtctccaagattaatgaaggaataggtgacaagattggattg
cttgttcaatcactaacaacatttgtgacaggatttattgttggtctcataagaggatgg
aaattaacccttgtaatactagcagttagccctgtcctgggactttcagcagccctctgg
gcaaaggttctctctgcattcactgacaaagaacaggctgcatatgcaaaagcaggtgct
gttgcagaagaagttctggcagcaatccgtactgtaatagcttttggaggacaagaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacggattggaataagaaaggct
attacagcaaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gcattctggtatggaactactttgatcttaactgatgattacactattggcaaagttctt
acagtctttttctctgtattgattggagctttcagtattggacagactgctccaagcata
gaggcatttgcaagtgcaagaggagctgcctacaccatctttaatataatagacaatgaa
cctcaaattgacagctattcagagacaggttacaaaccagaccacataaaagggaacttg
gaattaaaaaatgtttacttcaattatccatccagaccagatgttgagatactgaagggc
ttgaatctcaagattgattctggccagacagtggccctggttggtggcagtggctgtggg
aaaagcacaactgttcagctcatccagagattttatgatcccaaggaaggcatggttacc
attgatgggcaggatattaagaccttaaacgtaaggtatctgcgggaggttattggtgtg
gtgaatcaggagcccgtgctctttgccactactattgcagaaaatatccgttatggccgt
gaggatgtcaccatggaggagattgaaaaagccaccaaggaggcaaatgcttatgacttc
atcatgaagctacccaataaatttgaaactgtggttggagaaagaggggcacagctcagt
ggaggccagaagcaaagaatagcaattgccagagctctggttcgcaatcctaaaattctt
ctgcttgatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaggcagca
ctggacaaggcaagggaaggacgtaccacggttgtggtagctcatcgactgtcaacagtc
cgaaatgcagatgtgatagctgtgtttgaaggtggagtaatcacagagttaggcaatcat
gctaaattgctcgagaaaaagggcatctactacaaactcgttaacatgcaggcaatagaa
gctgaagttccatcatcagaaaattatgagaatgtacttccatcatcagaaaattatgag
aatgtatatagtgtcaaaaagagtgaatttgaaccagaatctgaagaatccttaagtagg
ggattgagaagacgatcaactcggagaagcatgaaaaagccaggagagcaaaatgatagt
cctgatgaggaaaaaacttcacctgctgaagaagtacctccagcttcatttctgaaaatt
atgaagttgaacaaaactgaatggccatactttgtagctggaaccttgtgtgcaattatc
aatggaggtttacaacctgcatttgcagtcatattttctgaaattatagggattttttca
gagacggacaaggatgtcttaagaaaacagagcaacttatattcactgctgtttttagca
cttgggatcatttccttttttactttcttttttcagggtttcacatttggcaaagctgga
gaaattcttacaatgaggcttcgattcatggcatttaaagcaatgcttagacaggatatg
gcctggtttgataatcctaaaaatagcactggagcattaactacaagacttgctaatgat
gcctctaatgtgaaaggtgcaactggtgtcagactagcattaattgcccaaaacatagcc
aacctggggactggaattcttatatcattaatttatgtctggaagctgaccctgctactt
ttagctgttgtgcccatcattgcagtggcaggaatgattgaaatgaagatgttggctggg
catgctaagaaagataaacgagagctggaagctgcaggaaagattgccacagaagcaata
gaaaatattagaactgttgttagcttgacactagaaagaaaatttgagttgatgtatgga
gaacatctgattctaccctacagaaattctgtgaagaaggcacatatatttggcttttgt
tttgccctttcacaagcaatgatgttcttcacctatgccggctgcttccggtttggtgcc
tatctagtggtaaatgatcacactgagtataaaaaggtatttctagtgttttcagctgtt
gtatttggtgcaatggcactaggacaaagcagttcttttgctccagactatgccaaagcc
aagatatcagcagcccacttgtttctgctgtttgaaagagtgccctcaatagacagttac
agtgaggaaggagacaagcctgaaacatttgagggaaacataacaatgaaagatgtggca
tttaactacccaaaccgaccagaagtcaaaatcctgcaagggttgaatctaaaagtagaa
aagggacaaaccctggctcttgttggcagcagtggctgtggaaagagcactgttgttcag
ctgctggagagattttatgacccacttgatggagaaatgatttttgatggcaaaaatgca
aaggcactgaatatccagtggttgagagctcagattggtatcgtctcacaagaaccaatc
ctgtttgactgcactattgccgaaaacatcgcctatggagacaacagccgggaggtctcc
tttgaggaaattgttagtgcagcaaaacaagccaatattcattccttcattgactcactg
ccagataaatacaatacccgtgtcggagacaagggaacccaactttctggtggccagaaa
caacgcatcgcgattgcccgagctcttgtacgcaagccccaaattctgcttctggatgaa
gctacttctgccttagacacagaaagtgaaaagattgtccaggaagcgctggataaagct
cgagaaggtcgcacgtgcatcgtgatagctcaccgcctctccaccatccaaaatgctgac
aagatcagcgtggtccagaatggcagggtcgtagagcaaggcacccaccagcagcttctg
gctgaaaaaggcatctactattccctggtcaatgttcaaagtggataa
DBGET
integrated database retrieval system
