Lonchura striata (white-rumped munia): 110482452
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Entry
110482452 CDS
T05897
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110482452 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110482452 (NIPBL)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110482452 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_GCN1_C
Cnd3
Cnd1
Motif
Other DBs
NCBI-GeneID:
110482452
NCBI-ProteinID:
XP_021407400
LinkDB
All DBs
Position
Z:36926877..37073742
Genome browser
AA seq
2777 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHSSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRAASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFMCVPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQENENRQMEFQQNETRQLESKYNQSKQLEVKHESRQMEMKQNENR
QTELKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLSDKKIEISRHKLDVKSDPSRMKPESRPDPTKPRPDGHSVSDAPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQEGKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKIDSNKAH
GDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRKSGHYHEGRRISGSGRYRNRSPDDSDMDDYSPPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTEKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPTAEKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSGEETESDSN
SGSGSESEEEASKPRKLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEDVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARV
VQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNK
VVQTLRSLYAAKDGTSS
NT seq
8334 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttttggcttgcagggatgaaaat
ctggtttcacagcttgtccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagttctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacagctcatcct
caaatgcagcaagcttccgtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgtctggaaattcagctaatcatcatgctgataattct
agacacagctcaaatgaagactacctacagatggtgcacagactcagtagtgatgatggt
gatccttcaataaggaatgctgcgtctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagcgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctttaaagaagcggaaacaagaaaataaaccaccagaggctggaggtgctact
ggagggaatagagcagcttctcaggagacaggttctgcaggaaatggggcacggccagcg
ctgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgacgggtttatg
tgtgttccccaagaagacactgttggagttcttaaatttaaacctgaaaatcatccagaa
atttttaggaaaaagtcagactttgaaagtcaaaagacagatatccaggaaaatgaaaac
agacaaatggaattccagcaaaatgagaccagacagttagaaagtaaatacaatcaaagc
aagcagttagaagtgaaacatgaaagcagacaaatggagatgaaacagaatgagaacaga
cagacagaactgaaacaaaacgagagcaggcaaatggagatgaaacaaaatgagggaaaa
caaaataatggcaaacaagaaatacggcaaaggccagaaacgccaaaacagaagagtgaa
ggtagacctgaaacaccaaaacagaagagtgaaggaagacctgaaacacctaaacacaaa
catgataataggagagattccagtaaacctttgtcagacaagaaaattgaaatatctagg
cacaaactagatgtgaaatctgatccttcaaggatgaaacctgaaagtcgacctgatcca
acaaaaccgaggcctgatggacactcagtttctgatgcaccaaggcgtgaccatgatagc
cttaaacaaagatctgaggacaggggagagtcggagagatacagaggagatccatccaag
attagaaggcctgaatatttgagatcctcaaacaaaaatgagcatgattctaagcatggt
attaaatctgatggttcaaaacctgagaaatttgaaaggaaatataggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaagacctgacagccctcgtattaaacag
gaaggtaaaggggattctagcaaatcaagacctgataaacctggttttaagtcaccaaac
agcaaagatgaacgaaggacagatggtaataagagtaaaatagatagtaataaagcacat
ggtgacaataaagcagagtttcccagttatttgttggggggaagatctggcgcattgaaa
cattttgtcattccaaaaatcaagcgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttctctggatgatgtgcag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcatccaaacctaataaaggtagcatagatcagtcagtgttaaaagagttgcctcct
gagctcctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgacgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagaacatgacaggagaagttccggtgaccataggaaaagtggtcat
taccatgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcccgatgac
tctgatatggatgattattctcctcctcctagcctcagcgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaagatttactgcttcaatagagaatattttggaaaatctg
gaagacatggatttcacagcttttggtgatgatgatgagattccgcaggaattgctactg
ggcaaacatcagcttagtgagttgggtagtgaatctgcaaaaatcaaggcaatgggcatt
atggacaagctctcaacagaaaaaacagtaaaagttctgaatattttggagaagaatatt
caagatggatcaaagctttcaactttacttaaccataataatgacactgaagatgaggag
agattatggcgagatcttattatggaaagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaata
gaaagagttattcagtacacaaaatttcatttgcagaacactctctatcctcaatatgat
cctgtgtatagagtggatcctcatggtggtggtgttttaagttcgaaagcaaaacgtgcc
aagtgttccacccacaagcaaagagttatagttatgttgtataacaaagtttgtgacatt
gtcagcagcttgtcagagttgctggagatacagcttctcactgatacaactattcttcag
gtatcatcgatgggaataacacctttctttgtagaaaatgtcagtgagctacagttatgt
gccatcaaattagtgactgcagtgttctcccggtatgaaaaacatagacagttaatatta
gaagaaattttcacttcccttgcacgactgccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccaacagcagaaaaggattctaattcg
gaggaggaatcaaacaagaaagtggatcaagatgtgcttattactaactcatatgaaaca
gccatgaggacggcacagaatttcctttctatttttcttaagaagtgtggcagtaaacaa
ggagaggaagattacaggccactatttgagaactttattcaagatcttctttcaacagtc
aataaaccagaatggccagctgcagagttgctacttagcttactaggaaggctattggtt
caccagttcagtaacaaatccacagaaatggcattaagagttgcatctcttgactatctt
ggaactgtagcggcaagactgaggaaagatgcagtcactagcaaaatggatcaaggatct
ttagccagaatcctgaaacaggtttcaggaggggatgatgaaattcaacagctgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcttcattagtgttttctcgg
aagttttatgtagctcagtggttccgtgatacaactatggaaacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccaca
ggacaaatcatgcatagagcggaaagtcgcaaaaagtttctacgaagcatcatcaaaact
gctccatctcagttcagtacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagaccccagcattctagccaggctggatatgcaa
cgaggagttcatgggcggctaatggataactccactagtgtaagagaagcagctgtggag
ctgcttggacgatttgtgctctgtcgtcctcagcttgctgagcagtattatgacatgctg
attgaaagaatattggatactggtatcagtgtcagaaaaagagtcataaaaatacttagg
gatatctgcattgaacaaccaacctttcccaaaattacagaaatgtgtgtgaaaatgatt
cggagagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaagctc
tggtttactccaactccacaccatgacaaagaagcaatgacaaggaaaatactgaacatc
actgatgtggttgcagcttgtagagatacagggtatgattggtttgaacagctgcttcaa
aatctgttgaagtcagaagaggatgcctcatataaacctgtgaagaaagcctgtacccag
cttgttgacaatttggtcgagcacattcttaaatatgaagaatctttatcagattctgac
aataaaggtgtgaattccggtcgcttggttgcttgcataaccactttgttcttattcagc
aaaataagaccccaactaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtactcagaatgatttcatggtgatctgcaatgttgcaaaaatcttagagctt
gtagtgccactaatggaacacccaagtgagacctttcttgccactattgaggaagacctc
atgaaactcatcatcaaatacggcatgacagttgttcagcactgtgtgagttgtcttggg
gctgttgtgaacaaggtcacccagaactataaatttgtgtgggcctgttttaatagatac
tatggtgcactttctaaattgaaaaatcaacaccaagaagaccccaacagtacaatactt
actgccaataaaccagcactccttagatcacttttcactgttggagcactgtgccggcat
tttgattttgatcaggaagattttaagggcaacagtaaggttaacattaaggataaagta
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaagctatt
attggtcttggatttgcatttatacagcacccaagtttaatgtttgaacaagaagtgaag
actctgtacaacagcattctttcagataagaactgctcagtaaacttaaaaatccaggtg
ttaaaaaacctccagacctacttgcaggaggaagatacacgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataac
cagtccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccgtacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgaccaacagttggtggaaatagacaaaaaatatgctgggttcatt
cacatgaaagcagtggctggtatgaagatgtcttaccaagtacagcaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacacgatgaatcatccagtgcactgtgttca
cacctctactccatgattcgagggaaccgtcaacacagacgagcctttctaatttcttta
ctcaacctctttgatgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccttaccaaacacaggaagagccattgtttataatgcatcatata
gacatcacactatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggaaagaaagccttcatcaggtgaggagaccgagagtgacagtaac
agtggtagtgggagtgaaagcgaggaggaagcttctaagcctcggaagttacggaaacga
gtggactctgattcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgctaatgtctcccaaggcatattattactt
ctgatgctgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtttatgataaagctataaacaggaagacaggagtg
cattttcatccaaaacaaactttggattttctgcgaagtgatatggctaattccaagatc
acagaagatgtgaagaggagtatagtaaagcagtacttagatttcaagctccttatggaa
catttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaagg
tcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtc
atggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagta
gtacagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcc
tggactgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaa
gagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaa
gttgtgcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
