Lonchura striata (white-rumped munia): 110482524
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Entry
110482524 CDS
T05897
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110482524 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110482524 (EXOSC5)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110482524 (EXOSC5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110482524
NCBI-ProteinID:
XP_021407517
UniProt:
A0A218V0V8
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Position
Z:complement(496896..499670)
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AA seq
224 aa
AA seq
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MAAEVVETEAVDGPCRLRRFSCELGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKISKELP
DRAALDVLLRPKVGLPGVLERSREQLLQQTCEAVVLGVLHPRTAISLVLQVLSDAGSLLS
CCLNAACMALLDAGLPLSALFCGVTCALQPDGAILLDPTARQEQEARAILTFAIASTDRK
VLMVTTKGSCSVQEMQQCLAVAQRAADTIFQFYRDSVRRRYSKS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggtggtggagacggaggcggtggacgggccgtgccggctgcggcgcttc
tcctgcgagctggggctgctctcgcggcccgacggctcggccgccttcctgcagggggac
acctcggtgctggccgggctgtacggccccgcggaggccaagatcagcaaggagctgccg
gaccgggcggcgctggacgtgctgctgcgccccaaggtggggctgccaggtgtgctggag
cgcagccgggagcagctgctgcagcagacgtgcgaggccgtggtgctgggtgtgctgcac
ccgcgcaccgccatctccctggtgctgcaggtgctcagcgacgccggctcgctgctctcc
tgctgcctgaacgccgcctgcatggcgctgctggatgcgggcctgcccctctctgctctc
ttctgcggcgtcacctgcgctctgcagcccgacggcgccatcctgctggaccccacagcc
cggcaggagcaggaggcacgcgccatcctcaccttcgccatcgccagcaccgacaggaag
gtgctgatggtcaccaccaagggcagctgctccgtgcaggagatgcagcagtgcctggcc
gtggcccagcgcgccgccgacaccatcttccagttctaccgcgactctgtgcgccgccgc
tactccaagtcctga
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