KEGG   Lonchura striata (white-rumped munia): 110482751
Entry
110482751         CDS       T05897                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110482751 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsr03041]
    110482751 (RBM22)
Spliceosome [BR:lsr03041]
 Complex B
  Other components
   Prp19-related factors
    110482751 (RBM22)
 Complex C
    110482751 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12 RRM_PARP14_3
Other DBs
NCBI-GeneID: 110482751
NCBI-ProteinID: XP_021407892
UniProt: A0A218V1D4
LinkDB
Position
13:complement(12025918..12033258)
AA seq 420 aa
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtccacatcgctgggctccaacacctacaaccgccagaactgggaggatgcggacttc
cctatcctgtgccagacgtgtcttggagaaaatccctatatccggatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggcccttcacggtgttccgctggtgccccggg
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaatgtc
tgtcagacctgcctgctcgacctggaatatggtttgcctatccaagtccgggatgcagga
ctctcccttaaggatgaaatgcctaaatctgacgtcaacaaagaatactacacccagaac
atggagcgagagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccatactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaacctacagatccagatgatcctctggctgaccagaacatcaaagat
cgttactatggaattaatgatcctgtggctgacaagcttctgaaacgagcatcaaccatg
ccccgtctagatcctcctgaagacaagactattactacactgtatgttggaggccttgga
gataccatcactgaatcagatctaagaaatcacttttaccagtttggggagatccggacg
ataacggtggtgcagaggcagcaatgtgctttcatccagtttgccaccaggcaagctgca
gaggtggctgctgagaaatccttcaacaaactcattgtcaacggccgcaggctcaacgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacggaa
tcaggaataaagctggagccagttccaggacttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggcccctcagccgtg
gtgaacattgccctgccacctcctcctggcatcgctccaccgccgcctccaggttttgga
ccacacatgttccacgccatggggcccccacctcccttcatgagagccccaggccccatc
cactacccgtcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag

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