Lonchura striata (white-rumped munia): 110482774
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Entry
110482774 CDS
T05897
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X2
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110482774 (RNF130)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110482774 (RNF130)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110482774 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
SP24
PspB
Prok-RING_4
AbrB
EGF_Hmr-1
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
110482774
NCBI-ProteinID:
XP_021407947
UniProt:
A0A218V0U3
LinkDB
All DBs
Position
13:complement(11587624..11637822)
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AA seq
426 aa
AA seq
DB search
MSWRWARQHWNGGSSVLLLLPLLLWHGRVRPAGADNASQAYYTALINVTVLSPERGGPTL
LRIDRGRYGQDSPKVEVKGLLVAPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNC
TFKEKILRAASHNATAVVIYNNVSSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNI
SVLMAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRR
LGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKVCVDP
WLSEHCTCPMCKLNILKALGIVPNVPCTDNVAFDMERLTRGQPASRRSALGDFGTDSSLS
LEPLRTSGMSQLPQDGELTPRSGEINIAVTSSHFFHRNSLSPRSLVYESEFSTIEPALDM
YDENKT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcactggaacggcggctcctccgtgctgctgctgctg
ccgctgctgctgtggcacggccgggtccggccggccggcgccgacaacgccagccaggcg
tactacaccgcgctcatcaacgtgaccgtgctgagccccgagcgcggcggccccacgctg
ctgcggatcgaccgtggccgctacgggcaggactccccgaaggtggaggtcaaggggctg
ctggtggctcccgtccctatcaacggagttgcagatcgtctgggctgtgaccctcgaacg
cgtttccaggtcccaccaaacaccaagcagtggattgctttactacagagaggaaattgt
acatttaaagagaaaatactgcgagcagcttcacataatgccacagctgtggtcatttac
aacaatgtatccagtgaagaacctgtcacaatgactcatcaaggaactggagacattgtt
gccgtcatgattacagaatcaaaggttaaggagatcttgaattacttggaaaagaacatc
tctgtcctgatggccatagcagtggggtcccgtgttcctccgaagaacttcagccgtggc
tctctagtctttgtgtcaatatcattcattgttttgatgatcatttcttcagcatggtta
atattttacttcatccagaagatcaggtacacaagtgcacgtgacaggaatcagcgtcgt
cttggagatgctgccaagaaagccattggtaaattgacaaccaggacagtaaagaagggt
gataaggaaacagacccagactttgatcattgtgctgtctgcattgagagttacaagcag
aatgatgttgttcgcattttgccatgcaagcacgtgttccacaaagtctgtgtggatcca
tggctcagtgagcactgtacgtgtccaatgtgtaaactgaacatcctgaaagcactggga
attgtgcccaacgtgccgtgcacggataacgtcgcctttgacatggagaggctgacgcgg
gggcagccggcgagcaggcgctcggcgctcggcgacttcggcaccgacagctccctcagc
ctggagcccctgcgcacctcgggcatgtcacagctgccacaggacggggagctgacacca
aggtcaggagagatcaacattgcagtgacaagcagtcacttcttccatcgtaattctctg
tcccctcgaagcctggtctacgagagcgagttctcaaccatcgagcctgccttggacatg
tacgacgagaacaaaacctga
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