Lonchura striata (white-rumped munia): 110482828
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Entry
110482828 CDS
T05897
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110482828 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110482828 (DROSHA)
03009 Ribosome biogenesis [BR:
lsr03009
]
110482828 (DROSHA)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110482828 (DROSHA)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
110482828 (DROSHA)
Messenger RNA biogenesis [BR:
lsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
110482828 (DROSHA)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
RNase
110482828 (DROSHA)
Prokaryotic type
rRNA processing factors
110482828 (DROSHA)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
110482828 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
110482828
NCBI-ProteinID:
XP_021408026
LinkDB
All DBs
Position
2:complement(59658161..59729821)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYEQQTAPPTTYSNPPAT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSN
TPVPGAPAGQSTFPYMMPPPTVPHPPPPPVMPQQVSYQPVYSAGYSQQSFPPPSFSSYQH
SSGSFPSSAAGSSASSSHFRHTGQYQGEKSQSDRRSPDRSKHYDEHRHREHGHIHGDRHR
SANHGDRRDRGRSPDRRRQESSRHRTDYERGRISPHHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSSKEKNYTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQERESEETEEAKK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctgggcgaggatgtccccgtggccaggggggaccaggagcaaggact
tcaacacagacctaccgccctcagaacctccggcagctccacccacagcagccctccgtg
cagtaccagtatgagcagcaaactgctcctccaacaacctactccaaccctccagccacc
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccaccatttccaaaccaccagatgaggcag
agcttcccagtgcctccatgtttcccacccactcctccaccagtgccaaaccctagcaac
actcccgtgccaggagcacctgctggacaaagcacctttccttacatgatgcctcccccc
acggtaccacaccctcccccgccgccagtcatgccgcagcaagtcagctaccagcccgtg
tactcggcaggctactcgcagcagtcgttcccgccgcccagcttcagcagctaccagcac
agctccggctccttcccgagcagcgctgccggcagcagcgccagcagcagccacttcagg
cacacggggcagtaccagggagagaagtcccaaagcgaccggcgctcccctgacaggagc
aagcactacgatgagcaccggcaccgcgagcacgggcacattcacggcgacaggcatcgc
tccgccaaccatggggatcgtcgggatcggggccgcagtccggataggaggaggcaggaa
agcagtcggcaccggacggattatgagagaggaaggatatcgcctcatcacagaagttat
gagcgaaacagggagcgggagagggagaggcatcggcaccgtgacagcagaagatcacca
tcaccagacagatcctacaaaaaggattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaacacggtgggaggaggacagagaaaggtggtctgaaaaccagagctcc
agtaaagagaaaaattatactgctgtcaaagacaaagaatcagaagagaatgcatctgaa
aaaaatgaagaggaagatgaggaattgcttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgggatctctatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaaaaccaagctggatgaagatttagag
agctccagtgagtcagagtgtgactctgaagatgacagcagctgctccagcagttcagat
tcggatgttattgacgtcattgcagaaattaagcgtaaaaaagcacaccctgaccgtctc
catgaggaattgtggtacaatgatccaggacagatgaatgatggacctttgtgcaaatgc
agtgctaaagcccggagaacaggaataagacatggcatttatcctggcgaagagcccatt
aaaccatgtcgtcctatgaccaacaatgctggaagactataccactaccgaattactgtg
tcacctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacatgccccactgacaaatattcctctatgc
aaagtaatcaggtttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggccttgaactgttctcttcatatctattcaaagatattttggag
ttgtatgactggaatcttaaaggtccttcacttgaaaatgattctgtttcctgtcccaga
taccacttcatgccacggtttgtgagatttcttccagatggaggaaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcagtaaagctctggtgcctgaagaggag
attgccaatatgcttcaatgggaagaactggaatggcagaaatatgcagaagaatgcaaa
gggatgatcgttaccagccctggcatgaagcccagctcagttcgtattgatcaactagac
cgcgaacaattcaatcctgatgtaattaccttccctattattgtgcactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttatgtg
aagctgcgtcacctactggctaatagtcccaaagtcaaacaggctgataaacagaaatta
tcacaaagagaggaagcactgcagaaaattcgccagaagaacacaatgagacgtgaggtg
accgtggagttgagcagccagggattctggaaaacagggatacgctctgacgtctgccag
cacgcaatgatgcttcctgtcctcacccaccatgtccgttaccatcagtgtctgatgcac
ctggacaaattgataggctacacctttagagataggtgcttactgcagcttgccatgact
cacccaagccatcatttaaattttgggatgaatccggatcatgccagaaattctttatcc
aactgtgggattcgacagcccaagtatggagatagaaaagttcaccatatacacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccagaattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccactctggaggaaggaggattagctacg
taccgcactgccatcgtacagaaccaacacctggccatgctggctaagaagctggagcta
gaacgattcatgctctatgctcatggtccagacctttgcagggagtcagatctccgccat
gccatggccaactgctttgaagccctaataggagctgtttatctggagggaagcctagaa
gaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccactacacccactccaactacaggagtccaatactgacaggcagctcatt
gagacctctccggttcttcaaaagcttacagagtttgaggaagcaattggagtcatcttt
actcatgttcgacttctagcacgtgcattcactctgaggacagtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactccataatgcagttggtagcc
acagagtatttattcatacatttccctgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaacaggacacaggccaaggtggcagaagagctgggcatgcaagaa
tttgccatcactaatgacaagacaaaaagacctgtaactcttcgaactaagactttggct
gatctcttagaatcttttattgctgccctttacattgataaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagtttatattaaatcaggattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccggacattcctctttacaagaccttgcagacagtgggaccttctcatgccaggacgtac
acagtagctgtctatttcaaaggggaaagaataggatgtggtaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttcctcagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagaattgaggtgggaa
agagagcatcaagagagagagtcagaggagactgaagaagcaaagaaataa
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