Lonchura striata (white-rumped munia): 110482904
Help
Entry
110482904 CDS
T05897
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04382
Cornified envelope formation
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
lsr04514
Cell adhesion molecules
lsr04810
Regulation of actin cytoskeleton
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110482904 (ITGA6)
04514 Cell adhesion molecules
110482904 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110482904 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110482904 (ITGA6)
04810 Regulation of actin cytoskeleton
110482904 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110482904 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110482904 (ITGA6)
04515 Cell adhesion molecules [BR:
lsr04515
]
110482904 (ITGA6)
04090 CD molecules [BR:
lsr04090
]
110482904 (ITGA6)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110482904 (ITGA6)
Exosomal proteins of breast milk
110482904 (ITGA6)
Cell adhesion molecules [BR:
lsr04515
]
Integrins
Integrin alpha subunits
110482904 (ITGA6)
CD molecules [BR:
lsr04090
]
Proteins
110482904 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
110482904
NCBI-ProteinID:
XP_021408155
LinkDB
All DBs
Position
7:complement(17859337..17900971)
Genome browser
AA seq
1087 aa
AA seq
DB search
MAALLLLYLPLLPGLAGAFNLDTDNVISWSGETGSLFGFSLAMHRQLQPQEKRLLLVGAP
REKAFPAQQANRTGGLYSCDIASPNTNCLRVKFDEETDPKMESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDESRQD
KNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHM
FEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYMNRQGKWAGVRP
LRLNGTTDSMFGLAVENVGDINQDGYPDIAVGAPYDGFGKVYIYHGSKNGINTKPAQILD
GEKTNTNFFGYSIAGNMDLDKNSYPDVAVGSLSDSVNVYRSRPVISIRRNITVQPDRIDL
KKRNPEDHGEIRMDVKACFKYTANPRNLNPRIKINYTFEVENERRQLGLPSRVRFSDHPS
DQFTASTTLRGQNSWECVTTKLILQEKIKDKLRPIPISVSVKIAGLESPSKRKESALPDL
IPILNSNESETETTKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPLENGMPV
LVLKDQKDIAVEITVTNNPSDIKNPQKDGEDAYEAKLIATFPDSLTYSAFREMRGYPEKQ
LTCGANQNGSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLETTSTQVNLT
PITASAKVVLELLLSLTGVAKPSQVYFGGNIIGESAVKSEDDIGNLIEYEFRVTNLGRPL
KTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLEKVYCQPESEINSLHVAESHNSRRKRE
VAEKQITDSQAFSLFSERKYKTLSCNVNARCVDIKCPLKGFDSKASIVLRSRLWNSTFLE
EYSKMNYLDILVRASISVPAAAKNVKLTNEVAQVRVTVFPAKPVALYTGVPWWIIAVAIL
AGILMLALLVFLLWKCGFFRRSRYEDSVPRYHAVRIRKEERQIKDGKSQDLETKQWFTKW
NENESYS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgcttctcctctacctgcccctcctgccggggctggccggcgccttcaac
ctggacacggacaacgtgatcagctggagcggggagacgggcagcctcttcggcttctcc
ctggccatgcaccggcagctgcagccgcaggagaaacggctattgctggttggagctcct
cgggaaaaggcctttccagcccaacaagccaatagaacaggagggctgtacagctgtgac
attgcatctccaaatacaaattgcctgcgtgtcaaatttgatgaggagactgacccaaag
atggagagtaaagaagaccaatggatgggtgtaactgtccagagtcaggggccaggagga
aatgtagtgacgtgtgcacatcgctatgagaaaaggcagtatgtaaacacagtgcaggag
acccgggatatcattggaaggtgctatgtgctgagccaggacctcactattaaggatgat
atggataatggagtatggagtttctgtgatggtcgtttaagaggccatgagaagtttggt
tcctgtcagcaaggtgttgctgctacttttactagagactatcattatattgtgtttggt
gccccaggcacttacaactggaaaggggtggttcgtgcagagcaaaagaatcagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagagccgccaggat
aagaatctagttcctgttccagctaacagttacttaggtttctctttggactctggtaaa
ggaattgtctcccaagatgagatgacttttgtgtctggtgccccaagagcaaaccacagc
ggagcagttgttttactaaaaaaagaaaaaaatcagagagcactttccctggagcacatg
tttgaaggagaagggctggcctcctctttcggctatgatgttgctgttgtggacctcaac
agtgatggctggcaggacatcgttgttggggccccgcagtactttgacagaagtggggat
atcgggggtgccgtgtacatctacatgaaccgccaaggcaagtgggcaggggtgaggcct
ctgcgcttaaatggaaccactgactccatgtttggactcgcagtagaaaacgttggggac
attaaccaggacggatatccagatattgcagtaggggctccatatgatggttttggcaaa
gtatacatttatcatggatccaagaatggaataaatacaaaaccagcacagattcttgat
ggtgaaaaaacaaacaccaatttctttggttactctattgctggaaatatggacctggat
aaaaattcctaccctgatgttgctgttggttccctgtcagattctgtaaatgtgtacaga
tctcggcctgtgataagcattagaagaaacattacagtacagcctgatagaattgatcta
aagaaaagaaaccctgaggaccatggtgaaatcaggatggatgtgaaagcatgttttaaa
tatactgcaaaccccagaaatttaaatccaagaataaagatcaattacacgtttgaggtg
gaaaacgagaggcggcagctgggcctgccctccagggtgcgcttcagtgatcacccgtct
gatcagttcactgcaagtacaaccctcaggggacagaactcatgggagtgtgtgactaca
aagcttatactgcaggaaaaaattaaagataagctacgtcccattccaatatcagtcagt
gttaaaattgctggcctggaatcaccatccaagagaaaagagagcgcacttccagatctt
ataccaattctaaattcaaatgaatctgaaacagagaccacaaaagtggagttcttaaaa
gaaggatgtggagaagacaatgaatgtcacagcaatctcaagcttcagtaccgtttttgt
acaagagagggaaatgaagacaggtttacttacttaccacttgaaaatggcatgccagtg
cttgttctgaaagaccagaaagatattgccgtggaaataacagtgacaaacaatccatct
gatataaaaaatccacaaaaagatggtgaagatgcatatgaagctaaactaattgcaact
tttccagacagtctgacatactctgcattcagagagatgaggggttatcctgaaaaacag
ctaacatgtggtgctaaccaaaatggttctcaagcagagtgtgaacttggaaatcctttc
aaaagaaattctaatgtaaccttttatctgatcttaagtaccactaaggttaatgttgat
acaacagacttagacattaacctgaagctggaaacaacaagcactcaagttaatttgact
ccaattacagccagtgctaaagtggttcttgaattgcttttatccctcactggagttgct
aagccttctcaagtatattttggaggcaacatcattggtgaaagtgcagtgaagtctgaa
gatgatattggaaacctcatagagtatgaattcagagtaactaacttgggcagaccactg
aaaacatttggcactgcttccttggacatccagtggcccaaagaaattagtaatggcaaa
tggctgctttatttgatgaaaatagactccaaaggcttggaaaaggtctactgtcaacct
gagagtgaaatcaacagtttgcatgttgcggaatcccataactcaagaaggaagcgtgaa
gttgcagagaaacaaattacagacagccaggcattttctttattctcagaaagaaaatat
aaaaccttgagctgtaatgtgaatgcacgctgtgtggatataaagtgtcccctgaagggt
ttcgacagcaaagcatctattgtgctgcgttccaggctgtggaacagcaccttcttagag
gaatactccaaaatgaattaccttgacattcttgttagggcttctatcagtgttcctgct
gcagctaagaatgttaaactcacaaatgaagttgctcaggtgcgtgttactgtatttcct
gcaaaaccagtagccctttatacgggagttccgtggtggatcattgcagtggctatcctt
gctggaatactcatgcttgcactgttggtattcttactatggaagtgcgggttcttccgg
cgttccaggtacgaagacagtgttccccgctatcacgctgtaagaattcgaaaagaggag
cgacagatcaaagatgggaaaagccaagaccttgagacaaaacagtggttcaccaaatgg
aatgaaaatgaaagttattcttag
DBGET
integrated database retrieval system