KEGG   Lonchura striata (white-rumped munia): 110482904
Entry
110482904         CDS       T05897                                 
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04382  Cornified envelope formation
lsr04510  Focal adhesion
lsr04512  ECM-receptor interaction
lsr04514  Cell adhesion molecules
lsr04810  Regulation of actin cytoskeleton
lsr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110482904 (ITGA6)
   04514 Cell adhesion molecules
    110482904 (ITGA6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110482904 (ITGA6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110482904 (ITGA6)
   04810 Regulation of actin cytoskeleton
    110482904 (ITGA6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110482904 (ITGA6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsr04147]
    110482904 (ITGA6)
   04515 Cell adhesion molecules [BR:lsr04515]
    110482904 (ITGA6)
   04090 CD molecules [BR:lsr04090]
    110482904 (ITGA6)
Exosome [BR:lsr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110482904 (ITGA6)
  Exosomal proteins of breast milk
   110482904 (ITGA6)
Cell adhesion molecules [BR:lsr04515]
 Integrins
  Integrin alpha subunits
   110482904 (ITGA6)
CD molecules [BR:lsr04090]
 Proteins
  110482904 (ITGA6)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 DUF4381
Other DBs
NCBI-GeneID: 110482904
NCBI-ProteinID: XP_021408155
LinkDB
Position
7:complement(17859337..17900971)
AA seq 1087 aa
MAALLLLYLPLLPGLAGAFNLDTDNVISWSGETGSLFGFSLAMHRQLQPQEKRLLLVGAP
REKAFPAQQANRTGGLYSCDIASPNTNCLRVKFDEETDPKMESKEDQWMGVTVQSQGPGG
NVVTCAHRYEKRQYVNTVQETRDIIGRCYVLSQDLTIKDDMDNGVWSFCDGRLRGHEKFG
SCQQGVAATFTRDYHYIVFGAPGTYNWKGVVRAEQKNQTFYDLGIFDDGPYEVGDESRQD
KNLVPVPANSYLGFSLDSGKGIVSQDEMTFVSGAPRANHSGAVVLLKKEKNQRALSLEHM
FEGEGLASSFGYDVAVVDLNSDGWQDIVVGAPQYFDRSGDIGGAVYIYMNRQGKWAGVRP
LRLNGTTDSMFGLAVENVGDINQDGYPDIAVGAPYDGFGKVYIYHGSKNGINTKPAQILD
GEKTNTNFFGYSIAGNMDLDKNSYPDVAVGSLSDSVNVYRSRPVISIRRNITVQPDRIDL
KKRNPEDHGEIRMDVKACFKYTANPRNLNPRIKINYTFEVENERRQLGLPSRVRFSDHPS
DQFTASTTLRGQNSWECVTTKLILQEKIKDKLRPIPISVSVKIAGLESPSKRKESALPDL
IPILNSNESETETTKVEFLKEGCGEDNECHSNLKLQYRFCTREGNEDRFTYLPLENGMPV
LVLKDQKDIAVEITVTNNPSDIKNPQKDGEDAYEAKLIATFPDSLTYSAFREMRGYPEKQ
LTCGANQNGSQAECELGNPFKRNSNVTFYLILSTTKVNVDTTDLDINLKLETTSTQVNLT
PITASAKVVLELLLSLTGVAKPSQVYFGGNIIGESAVKSEDDIGNLIEYEFRVTNLGRPL
KTFGTASLDIQWPKEISNGKWLLYLMKIDSKGLEKVYCQPESEINSLHVAESHNSRRKRE
VAEKQITDSQAFSLFSERKYKTLSCNVNARCVDIKCPLKGFDSKASIVLRSRLWNSTFLE
EYSKMNYLDILVRASISVPAAAKNVKLTNEVAQVRVTVFPAKPVALYTGVPWWIIAVAIL
AGILMLALLVFLLWKCGFFRRSRYEDSVPRYHAVRIRKEERQIKDGKSQDLETKQWFTKW
NENESYS
NT seq 3264 nt   +upstreamnt  +downstreamnt
atggcggccctgcttctcctctacctgcccctcctgccggggctggccggcgccttcaac
ctggacacggacaacgtgatcagctggagcggggagacgggcagcctcttcggcttctcc
ctggccatgcaccggcagctgcagccgcaggagaaacggctattgctggttggagctcct
cgggaaaaggcctttccagcccaacaagccaatagaacaggagggctgtacagctgtgac
attgcatctccaaatacaaattgcctgcgtgtcaaatttgatgaggagactgacccaaag
atggagagtaaagaagaccaatggatgggtgtaactgtccagagtcaggggccaggagga
aatgtagtgacgtgtgcacatcgctatgagaaaaggcagtatgtaaacacagtgcaggag
acccgggatatcattggaaggtgctatgtgctgagccaggacctcactattaaggatgat
atggataatggagtatggagtttctgtgatggtcgtttaagaggccatgagaagtttggt
tcctgtcagcaaggtgttgctgctacttttactagagactatcattatattgtgtttggt
gccccaggcacttacaactggaaaggggtggttcgtgcagagcaaaagaatcagacattt
tatgatctgggtatctttgatgatgggccttacgaagttggtgatgagagccgccaggat
aagaatctagttcctgttccagctaacagttacttaggtttctctttggactctggtaaa
ggaattgtctcccaagatgagatgacttttgtgtctggtgccccaagagcaaaccacagc
ggagcagttgttttactaaaaaaagaaaaaaatcagagagcactttccctggagcacatg
tttgaaggagaagggctggcctcctctttcggctatgatgttgctgttgtggacctcaac
agtgatggctggcaggacatcgttgttggggccccgcagtactttgacagaagtggggat
atcgggggtgccgtgtacatctacatgaaccgccaaggcaagtgggcaggggtgaggcct
ctgcgcttaaatggaaccactgactccatgtttggactcgcagtagaaaacgttggggac
attaaccaggacggatatccagatattgcagtaggggctccatatgatggttttggcaaa
gtatacatttatcatggatccaagaatggaataaatacaaaaccagcacagattcttgat
ggtgaaaaaacaaacaccaatttctttggttactctattgctggaaatatggacctggat
aaaaattcctaccctgatgttgctgttggttccctgtcagattctgtaaatgtgtacaga
tctcggcctgtgataagcattagaagaaacattacagtacagcctgatagaattgatcta
aagaaaagaaaccctgaggaccatggtgaaatcaggatggatgtgaaagcatgttttaaa
tatactgcaaaccccagaaatttaaatccaagaataaagatcaattacacgtttgaggtg
gaaaacgagaggcggcagctgggcctgccctccagggtgcgcttcagtgatcacccgtct
gatcagttcactgcaagtacaaccctcaggggacagaactcatgggagtgtgtgactaca
aagcttatactgcaggaaaaaattaaagataagctacgtcccattccaatatcagtcagt
gttaaaattgctggcctggaatcaccatccaagagaaaagagagcgcacttccagatctt
ataccaattctaaattcaaatgaatctgaaacagagaccacaaaagtggagttcttaaaa
gaaggatgtggagaagacaatgaatgtcacagcaatctcaagcttcagtaccgtttttgt
acaagagagggaaatgaagacaggtttacttacttaccacttgaaaatggcatgccagtg
cttgttctgaaagaccagaaagatattgccgtggaaataacagtgacaaacaatccatct
gatataaaaaatccacaaaaagatggtgaagatgcatatgaagctaaactaattgcaact
tttccagacagtctgacatactctgcattcagagagatgaggggttatcctgaaaaacag
ctaacatgtggtgctaaccaaaatggttctcaagcagagtgtgaacttggaaatcctttc
aaaagaaattctaatgtaaccttttatctgatcttaagtaccactaaggttaatgttgat
acaacagacttagacattaacctgaagctggaaacaacaagcactcaagttaatttgact
ccaattacagccagtgctaaagtggttcttgaattgcttttatccctcactggagttgct
aagccttctcaagtatattttggaggcaacatcattggtgaaagtgcagtgaagtctgaa
gatgatattggaaacctcatagagtatgaattcagagtaactaacttgggcagaccactg
aaaacatttggcactgcttccttggacatccagtggcccaaagaaattagtaatggcaaa
tggctgctttatttgatgaaaatagactccaaaggcttggaaaaggtctactgtcaacct
gagagtgaaatcaacagtttgcatgttgcggaatcccataactcaagaaggaagcgtgaa
gttgcagagaaacaaattacagacagccaggcattttctttattctcagaaagaaaatat
aaaaccttgagctgtaatgtgaatgcacgctgtgtggatataaagtgtcccctgaagggt
ttcgacagcaaagcatctattgtgctgcgttccaggctgtggaacagcaccttcttagag
gaatactccaaaatgaattaccttgacattcttgttagggcttctatcagtgttcctgct
gcagctaagaatgttaaactcacaaatgaagttgctcaggtgcgtgttactgtatttcct
gcaaaaccagtagccctttatacgggagttccgtggtggatcattgcagtggctatcctt
gctggaatactcatgcttgcactgttggtattcttactatggaagtgcgggttcttccgg
cgttccaggtacgaagacagtgttccccgctatcacgctgtaagaattcgaaaagaggag
cgacagatcaaagatgggaaaagccaagaccttgagacaaaacagtggttcaccaaatgg
aatgaaaatgaaagttattcttag

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