Lonchura striata (white-rumped munia): 110483007
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Entry
110483007 CDS
T05897
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110483007 (DENND4A)
Membrane trafficking [BR:
lsr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110483007 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
110483007
NCBI-ProteinID:
XP_021408302
UniProt:
A0A218V013
LinkDB
All DBs
Position
10:complement(18696579..18746046)
Genome browser
AA seq
1887 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIARPKEPITDVTVLNKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
STPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
DTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIH
SLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDPP
PDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLNTLYQQLAELQQRPREDALME
LAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFEL
QGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGETR
LIELDDSYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLELFERPEGFLRAPNNK
LSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAGI
DPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKPPASTAHTSVP
GGLSDTANNTSLKEETKQGKTCLEDIQEQKEEKRESDSSSLSEVESTKGSGDCLPKLNYQ
NCRSDKATSSIVRLNGTIDSSVAEGSRESSVGLLFTSTFEDANEAEVIKNKSLRKRHKSA
VEADLREMPWESRNRNLSGDGLVGLMINRINPEANPGEMVEKLGADAKILSSALQKSIRP
KTLNIRSSSLESKRESLEKESSDEDAAFDCSFADKTESPVIFDLEDLDGEPETPTAVKTS
SEKSKKLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEEEEEDDDRSVSTPSARRD
LAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNANKRSPTIIQPCRRSSLPPNSPRPPSL
TKSKSYHAKHEERPRDRLWSSPAYSPNSPAKEQDTTSALTLVSSPSFNLDTLLTPKFDVL
KSSMFSAGKGVAEKASKWYSKFAMYAASAKDQNSDRASVSSLGALDSESTSLTDEDVCND
FESASPQENTTSEIKGISISKTSLESSASHDSSAKQFDQCGSLSKFPLPDKSELVSSCST
SSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLS
IEIRDLRRPGRYFLKSSPSTENMQFPSLFSSQSGKSCNTTATVGLTTSLMSVQEDVNSNS
KSKQHDNVDNVYARSIQIPSGRRQNASGSECTSHPVARSISTFGPLEEDEQENQKINHII
PTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFV
DHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNM
KLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVQLLQKDDDSFNQELLRSMVKSIKMNDV
YGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQ
VKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggcccgtgttgctgattactttgttgtcgcaggactaacggatatc
tcaaagccactggaggaggagatccacttcaacgatgcctgccataaaatcgccagacca
aaagaacccatcacagacgtgaccgtgctcaataaatccctgggggaggaggttcctcag
ggctacaagtgcatagatgtcactccctcgggcctgtctgcagatctcaataacggcagc
cttgtaggaccgcagatatacctttgttatcgccgagggagggataagcctccgcttact
gatttgggggttttatatgatgggaaagaaagagtcaagcaaggctgtgaaatcattcag
agcacgccgtatgggcggccggccaacatcagcggcagcgcctcgtcccagcgggtgtac
atcacctaccgcagggcctccgagaacatgacccagaacaccctggctgtcacagacatc
tgcatcatcatccccagcaaaggagagactcctccacacaccttctgcaaggtggacaag
aacctgaacaatagcatgtggggctcagctgtctatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcccgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctccctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgagctgtatcctgaa
gaaaacctcacagagaaacaaaaatctcagctgggattagcagctgctgttgagggaaaa
gacacgtgcagaacagtgcagacaaataaatgcatctgtctgctctctcactggcctttc
tttgatgctttcaagaagtttcttacctttctgtatcgttactccatttctgggccacat
gtcctccccattgagaaacacatttcccatttcatgcataaagtaccttttccatcccct
cagaggccaagaattctagttcagctatctccacacgataacttgattcttagccagcct
gtgtcatcaccactcccactgagtggtggcaagttttctacactacttcagaatttagga
cctgaaaatgcagtaactctgttggtgtttgctgtgacagaacataaaatcctcatccac
tcgttgcgaccttctgtcctcacgagtgtgacagaggcattggtctctatgatatttccc
ttccattggccttgcccatatattcctctctgtcccctggcactggcagatgtgctgagt
gccccgtgcccgttcatagtgggaattgattccagatactttgatctctatgacccccca
cctgatgtcagctgtgttgacctggataccaacacaatttctcaaactggagacaagaaa
gctattgcatggaagattttaccaaagaaaccttgtaaaaacctgatgaacactttgaat
actttgtatcagcaactggcagaattgcaacagcgaccaagagaagatgcattaatggaa
ttggcaatgaatgattatgattttaattctgggaagaaattgcatctgttagatttggag
atccaggaagcatttctctgtttcatggcttcaatcctaaaaggttacaggtcttacctc
aggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaacta
caagggttcctgaagagcagagaccgttcccatcagaagttctacaccctgatgaccaaa
acccagatgttcattcgcttcattgaggaatgttcttttgtcagtgacaaggatgccagc
cttgccttctttgatgactgtgtggataaagtagatatggacaaaactggggaaacacga
cttatagagctggatgactcctacaagagtgagcacacagttttcataacaccccctgag
atccctcatctgccaaatggggaagagcaccctctacaatacagctataatggatttcca
gtattaaagctagaattgtttgaaagacctgaaggatttctcagagcaccaaataacaaa
ctgtcctcaaaagccagtagccccaacagcccatcaccaatgttcagaagaactaaacag
gaaattaaatctgcccacaaaattgcaaagaagtactcctccatcccccagatgtggtcc
aggtgtttgctccgtcactgctatggcctttggttcatctgcctccctgcctatgtgaaa
gtctgccactccaaagtcagggctctgagaactgcctatgatgtgctacagaaaatgcac
accaaaaaaatagatccacctgacgaggtgtgctacagggtcctcatgcagctgtgtggg
cagtacgggcagcccgtgctggcagtccgggtgctcttcgaaatgcagaaggctggcatc
gaccccaatgccatcacctatggctactacaacaaggctgttttggaaagcacctggcct
tcaagcaatcgaggtggctatttcctctggatgaaaatacgaaatgttgtcttaggaata
gcacagtttaaaaaagcattgaaaaagccaccagcaagcactgcacatacatctgttcct
gggggactttcagacactgccaataacacatcactcaaagaagaaaccaaacaagggaaa
acttgtcttgaagacatccaagaacaaaaggaggaaaagagagagagtgactccagttct
ttgtctgaagtggagagcacaaaagggagtggggactgcttgcccaaactgaattaccag
aactgcaggagtgacaaagccacttccagcatcgtgcggctcaacggcaccattgacagc
agcgtggcagaggggagcagggaaagttctgtaggattgctgtttacatcaacttttgag
gatgccaatgaagcagaagttataaaaaataagtccttaagaaagagacataaaagtgca
gtggaagctgacttaagggagatgccgtgggaaagcaggaatcggaacctgagtggagat
ggcttagtgggactcatgataaacagaatcaacccggaagcaaaccctggagaaatggtt
gaaaaactgggagctgatgccaaaattctctctagtgcattacagaaaagcataaggcca
aaaactcttaatattagatcttcctctttagagtctaagagggaaagcctggagaaagaa
tccagtgatgaagatgcagcctttgactgcagttttgcagataaaacagagtctcctgtt
atctttgatctggaagacctggatggagaacctgaaacacctacagcagtgaaaacttcc
agtgaaaaatcaaaaaaactgcaaagaaagagcagctttccagtaaagccagtagaaaaa
acagatgttgaaactggatttgatccattgtctctgctggttgctgagacagagcagcag
aaagaggaagaggaggaggatgatgacagaagtgtttctactccatctgcaagaagagat
ttagctgaagaaatagtcatgtacatgaacaacatgagcagccctttgtccagtcgtgcc
ccaagcattgagctccaaaaaccctttgatgacagaaatgcgaataaaaggagcccaacc
attatccagccttgtaggaggtccagccttcccccaaactccccaaggccgcccagtctt
accaaatccaagagctaccatgcaaaacatgaagaaaggccaagggacaggctttggtct
tccccagcttattccccaaacagcccagccaaggagcaggacacaaccagtgcgttgaca
cttgtgtcatcaccgtcgttcaacttggacacgctgctgactcccaagtttgatgttctg
aaaagcagcatgttctctgctggaaaaggggttgcagagaaagcaagcaagtggtactcc
aaatttgcaatgtatgctgcatctgcaaaggatcaaaattcagaccgagcaagtgtttca
tctcttggagctctggactcagaatctacttctctcactgatgaagatgtctgcaatgat
tttgaaagtgcttctcctcaggagaacaccacatcagaaattaagggaattagcatcagc
aagacaagcctggaaagctcagcttcccatgatagctcagctaagcagtttgaccagtgt
ggttctctttccaagttccctttacctgacaaatcggagttggtgtcttcctgcagcacc
agcagtaccagtgtgttccagaactatgccatggaggtcctcatctcgagctgttctcgg
tgtcggacttgtgactgtttggttcacgatgaagaaatcatggcaggctggacagcagat
gattcaaatctcaatactacgtgtcccttctgtggcaatttatttctgccttttttaagc
atagaaatcagagatcttcggcgccctggacggtatttcctgaagtccagcccttctaca
gaaaatatgcagttcccatcccttttctccagtcagagtgggaagtcctgtaacaccaca
gccactgtaggtctcactacatccctgatgtctgtccaagaggatgttaattcaaatagc
aaatctaagcaacatgacaatgttgacaatgtttatgccagaagtatccagatcccttca
ggaaggagacaaaatgcctctgggtcagaatgtacaagtcaccctgtagcaaggagcatc
agtacttttggtcctttggaagaagatgagcaggaaaaccagaagatcaaccatatcatt
cctactggtagcctgcctgctactttgcaaggaccaacagattccttgggcctggaatgg
cgcttgcctagtcctgatcctataacggttccttacctcagtcctctggtggtatggaaa
gagcttgaaagcttacttgaaaatgaaggggatcatgcaataacagtggcagactttgta
gatcatcaccccatcgtgttctggaatttggtgtggtatttcaggcgcttggacttgccc
agcaacttaccaggattaatactttcttctgagcactgcaataagaactccaagattcca
cggaactgtatgtcagaggacagtaaatatgttcttattcagatgctatgggacaatatg
aaattgcatcaggatccaaggcaacctctatatattctgtggaatgctcagagtcaaaat
cgcactcttttgtttgagacccagaagtacccaatggtccagttattgcagaaagatgat
gactcctttaaccaggagctcttgaggagcatggtgaaaagcattaagatgaatgatgtg
tatggaccaatgagtcagatactggagaggctcaacaagtggccacatattaaaagacag
aggagcctttatagagaaatactgtttctttcacttgttgccctgggaagagataacatt
gatatagatgcttttgacagagagtacaaaatggcctatgatcgtctcactgctaatcaa
gtgaagaacactcataactgcgacagaccacccagcactggagtgatggaatgcagaaag
atttttggagaaccatatctttaa
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