Lonchura striata (white-rumped munia): 110483011
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Entry
110483011 CDS
T05897
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lsr01100
Metabolic pathways
Module
lsr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
110483011 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsr01003
]
110483011 (CHSY1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
110483011 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
110483011 (CHSY1)
Glycosyltransferases [BR:
lsr01003
]
Glycan extension
O-Glycan
110483011 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
110483011
NCBI-ProteinID:
XP_021408312
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All DBs
Position
10:complement(18075172..18148214)
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AA seq
786 aa
AA seq
DB search
MAGRGRRAWLSVLLGLVLGFVLASRLVLPRASELAAAARPHRARPQGCRPPPAAAAAAPP
RRPGPPAQSFLFVGVMTAQKYLRSRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPL
PGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFL
GQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVG
RCVRRFAGVQCVWSYEMQQLFYENYEKNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLH
SYMLSRKIAELRHRTVQLHREIVLMSKYSNTEIHKEDLQLGMPPSFMRFQPRHREEILEW
EFLTGKYLYSGADGQPPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGY
RRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDAKELASK
INQDSGSLSFLSNSLKMFVPFQLSRSKAERKELKDKKINILIPLSGRFDMFARFMGNFEK
TCLIPNQNVKLVVLLFNSNSNPDKAKQIELMRDYHSKYPKADMQVLPVSGEFSRALALEV
GSSQFQNESLLFFCDVDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSD
NHFAFTQKTGFWRNYGFGITCIYKGDLLRAGGFDVSIQGWGLEDVDLFNKVIQAGLKTFR
SQEIGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTN
GSVRTA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggccgccgcgcctggctcagcgtcctgctggggctggtgctgggcttc
gtgctcgcatcgcgcctcgtcctgccccgcgcctccgagctggcggcggcggcgcggccc
caccgagcccgcccgcagggctgccgcccgccgcccgccgccgccgccgccgccccgccg
cgccgccccggcccgccggcacagagcttcctcttcgtgggggtcatgacggcgcagaag
tacctgcggagccgcgccgtggccgcgcaccgaacgtggtccaaaaccattcccggcaag
gtcgaattcttctccagcgagggttcggacacgtctatccccatccccatcgtgccactt
ccaggtgtagatgactcctacccaccccagaagaaatccttcatgatgctcaaatacatg
catgaccactacttggacaaatacgaatggtttatgagggctgacgacgacgtttacatc
aaaggggacaaactggagaacttcctcaggagcctgaacagcagcgagcccctgttcctg
ggccagaccggcctgggcaccacggaggagatggggaagctggcgctggagccgggggag
aacttctgcatgggggggccgggagtgatcatgagcagggaggtgctgcggaggatggtg
ccgcacatcggcgagtgcctgcgggagatgtacaccacgcacgaggacgtggaggtggga
cgctgcgtgcgcaggttcgcgggggtgcagtgcgtctggtcctacgagatgcagcagctg
ttctacgagaactacgagaagaacaaaaaaggctacatccgggacctgaggaacagcaaa
atacaccgagctatcactctgcaccccaacaagaaccccccgtaccagtacaggctgcac
agctacatgctgagccgcaagatcgccgagctgcggcaccgcaccgtgcagctgcaccgc
gagatcgtgctcatgagcaagtacagcaacaccgaaatccacaaggaggacctgcagctg
gggatgccgccctccttcatgcgcttccagccccgccaccgggaggagatcctggagtgg
gagttcctcacgggaaaatatttgtactcgggtgccgacgggcagccgcctcggcgaggg
atggactcgtcccagcgcgaggcgttggatgacatcgttatgcaggtcatggaaatgatc
aacgccaacgccaagacgcgggggaggatcattgatttcaaggaaatacagtatggatac
cgcagggtgaaccccatgtacggagcagagtacgtgctggacctgctgcttctctacaag
aagcacaaggggaagaagatgacggtccccgtgaggaggcacgcctacctgcagcagacc
ttcagcaagatccagttcatggagcacgaagagatggacgccaaagagctggccagcaaa
atcaaccaggattctggctccctgtccttcctctccaactcgctgaagatgtttgtcccc
ttccagctcagcaggtccaaagcagaaaggaaggagctcaaagacaagaagatcaacatc
ctgatccctctctccggacggttcgacatgtttgcaaggttcatggggaattttgaaaag
acgtgcctcattccaaaccagaacgtcaagctggtcgtcctgcttttcaattccaactcc
aaccctgacaaagcgaagcagatcgagctgatgagagattaccactccaaataccccaag
gctgacatgcaggttctgccggtgtcaggggagttctcaagggcactggctttggaagtt
ggatcttctcagttccagaacgagtctttacttttcttctgtgatgttgacttagtgttt
accacagaattccttcagcggtgtagagccaacacagttttgggtcagcaagtgtatttt
cccatcatttttagccagtatgatccaaagattgtttatagtggaaaggttcctagtgac
aatcattttgccttcactcagaaaacaggtttctggaggaactatggctttggtatcacc
tgtatttacaaaggtgaccttcttcgagcgggtggctttgatgtctccatccaaggctgg
ggccttgaagacgtagatctatttaacaaagtcattcaagctggcttaaaaactttcaga
agccaagaaattggagtagtccatgtgcatcaccctgttttttgtgaccctaatcttgat
ccaaaacaatataaaatgtgcttggggtccaaagcttcaacatatgggtccacacaacag
ctggctgaaatatggtttgaaaaaaacgacccaaattttgggaaaagcagcaatactaat
ggctcagtgaggacagcctaa
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