Lonchura striata (white-rumped munia): 110483132
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Entry
110483132 CDS
T05897
Symbol
IFT56
Name
(RefSeq) intraflagellar transport protein 56
KO
K19685
intraflagellar transport protein 56
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110483132 (IFT56)
Cilium and associated proteins [BR:
lsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110483132 (IFT56)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
ANAPC3
TPR_16
TPR_2
TPR_17
TPR_8
TPR_9
TPR_12
TPR_6
TPR_1
TPR_11
FMN_red
Motif
Other DBs
NCBI-GeneID:
110483132
NCBI-ProteinID:
XP_021408476
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All DBs
Position
1A:complement(16484260..16539852)
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AA seq
554 aa
AA seq
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MMLSRAKPAVGGTPPPGDRRRKKGKEAPQLEELLAQRDFTGAIALLEFKQNVGEEEEDGN
LWIGYCAFHLGDYKRALEEYEALTKQATCNPDVWVNLACTYFFLGMYTQAEQAALQAPKS
GLQNRLLFHLAHKFSDEKKLMSSHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLE
NREYLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLKACNHFRLYNGKAAEA
ELKNLTDSSSSSFEFGKELIKHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLQQDD
VQEAYNLIKDLEPTAPQEYILKGVVNAALGQEMGSRDHLKIAQQFFQLVGESASECDTIP
GRQCMSSCFFLLRQFPNVLIYLNSIKSYFYNNDTFNFNYAQAKAAMGNFSEAEEVFLLIQ
SEKIKSDFVYLSWLARCYIMNKKPQLAWKLYLKMETSGDSFNLLQLIANDCYKMRQFYYS
AKAFDVLERLDNNPEYWEGKRGACVGVFQMILAGREAKETLREVLHLLKSTGNSQVEYIV
RVMKKWAKENRVPV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctcgcgggccaagccggccgtggggggtaccccgccgccgggagacaggcgg
aggaagaaagggaaggaggcgccacagttggaagaactcttggcccagagggacttcacc
ggcgcgatcgccttgctggagtttaaacagaacgtgggtgaggaggaggaggatggcaac
ctttggattggatactgtgcatttcatttgggtgattacaagagagctctagaggaatat
gaggctttaaccaagcaagcaacttgcaatccagatgtttgggtgaaccttgcctgtacg
tacttctttctggggatgtacacacaagcagaacaagcagccttgcaagcacctaagagt
ggtctccagaaccgtttactctttcacctggcacataagttcagtgatgaaaagaagctg
atgagctctcaccagaacctgcaagatgttacagaagatcagctcagcctagcatctatc
cactacatgcggtcccactaccaagaagctattgatatctacaagcgcattctgctggaa
aatcgggaatacctggctctgaatgtatatgtggccctgtgctattacaaactggattac
tatgatgtatcacaggaagtgctagctgtttatcttcagcaagttcctgacagcaccatt
gcccttaaccttaaggcttgtaaccattttcgactttacaatggaaaggctgcagaggca
gaactcaagaacttgacagacagttcttcatcatcttttgagtttggcaaggagctcatt
aagcacaatctggtggttttccgaggaggtgaaggggctttgcaagtcctgcctcctctg
gttgatgttattcctgaggcaagactgaatcttgtgatttactatctccagcaagatgat
gtgcaggaggcttataacctgattaaggacctggaacctacagctccacaggagtacatc
ctcaaaggggtggtaaatgcagcacttggacaagaaatgggctcgagagatcatctgaaa
attgctcaacagttcttccagttggtgggggaatcagccagtgaatgtgataccattcca
gggagacagtgcatgtcctcctgcttctttcttcttagacaatttcctaatgtcctaatt
tacctcaactcaatcaagagttacttctacaacaatgatacttttaacttcaactatgcc
caagccaaagctgcaatgggcaattttagtgaagctgaagaggtgttccttttgatccag
agtgagaagataaaaagtgattttgtttaccttagctggctggctcgctgctatattatg
aataagaaaccacagctagcctggaagctctatctgaagatggaaacatcaggggactcc
tttaacctattgcagctcattgcaaatgattgttacaaaatgcgtcagttttactattca
gccaaagcctttgatgttctggagagactggacaataatcctgaatactgggaaggcaag
agaggtgcttgtgtgggtgtatttcaaatgatcttagctggtcgagaagcaaaagagact
ctgcgggaagtactgcaccttctgaagagcactggtaattctcaagtagagtacattgtt
cgcgtcatgaaaaagtgggccaaggagaacagagtccctgtttga
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