Lonchura striata (white-rumped munia): 110483181
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Entry
110483181 CDS
T05897
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110483181 (UTP20)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110483181 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
110483181
NCBI-ProteinID:
XP_021408542
UniProt:
A0A218UZX1
LinkDB
All DBs
Position
1A:complement(17787545..17850862)
Genome browser
AA seq
2799 aa
AA seq
DB search
MKSKPAAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNL
TRHFVQFYNEVANKCQSFNQLVYYQNAIVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNELFNLMLRDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAETAMKLILMKLGPMTEEEIELPWVAVGEAFKQMIRSAAVHIHKEHFDIVFKCLEESL
LDLQRKITEVNCTVASEQMERILQAYLILVEHANGSKISLPEDVCQVLIKMLQTPYLSSS
CCKMLLNAISSFLLAENVLLPDSLTKETIQKVFASRFERHFLLDFSEAMFTMKQFERHFL
PCFLEYIEHFFSGTDAITKDEAVAILAKLILVKAEPPTIGSMAFEKYPLVFTEASVSSNT
RQQTSKRQGEKAVVPVLDHVLSLMHLPEKEDITDLSQAWVALVVLPHIRPMNKDHILPHV
TSFIDSLFTAIDKGSLCKGNLFVACQAVSTLLSLVESAEVLHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSQGNLMDLFEKLHPNISTGVSKVRLSTVRILSHFDNPP
SAQIEGDGTGEFQPLFAILLQAELVPATVNDYREKLLHLRKLRCDIVQPAIPSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAASYAEMELQDELDE
QEESIAEAESEKIPEGEVGTVFLEQLRSRTDCSERLDHTNYRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRRKISGTIAAKQVSAEEVNDVAMEEEEEEEEE
EEEEKEERKPFSIGVLKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSH
QDQNVQRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETTVVKTEHRPD
LIPVLMRILYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQF
SNGPCQTAVLQSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMT
AVVSCILQQREKVQPRLINPLKNLRRLGLKLVAEFFSDYETYSFSTEEIDAVFHAVVWPQ
VCRLASESQYSPTFLLKLIHTWSKNPRYFPLLAKQQPDHPESDILTNVFAVLSAKNLSEA
TSSLVMDIADSLLNSPDFEPTEQVSSLNVTDCVVTATGDVTEEPLSLGCRLVLPHVPAIL
QYFSKTMLSVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQTNMEQ
GTQIDILETVQNLLRHCSNPTSFLKPLAKLFSVIQNKLSRNKLCLVFQTLSDLDAKLKYI
TDVVKLNAFDQRHLDDIDFDVRLSAFQSITAHIKEMQTVDTDFLIPVMHNCFYTIQLGDM
ALSDNASLCLTSFIHRLAEISHTEEEYKELIQHTLLESVRRGLRSKTESIQQDYTSLLSC
LIQTFPTNPEFQDLVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEEKLVLSSK
SLQNYIMPYATTAIFSEKMLKHENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQ
IGTKLGVSLLEIVLEAFHFDHKTLEKQLVTIDNQEAAAMDLEPVVEAEETMELEQSEGEE
EEVEEKNGKNLSEKPVEPEQAAEPSENAEQVPKPVSFLPQNKEELQCLIKHIQETVTVNI
LPKLHRCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRMMQSLPQEVMEANLPSIL
LKVCTFLRNRFQEIRDIARNTLIKIMEVLGVHYLLYILKEMRSALIHGYQLHVLTFTVNL
LLKGLTTRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKIMEARKNKSYDSYEI
LGKFIGRSQVTKLILPLKEILESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSH
GLISENLPLLTEKAKKKAAPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSG
LRLLHMSLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPS
VSTNMESLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLL
GFAEEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIY
LKYILDYPLGDKLKPNLDFMLAQLEYEYETGRESALEIIAYLLDMFPQDLLHKHCGLFFL
SLCMMMINDDSAKCKKMAALTCKSLLRKISSEKQDLMFSLVTQWFHSKKSSHRRLAAQAC
GLFVEVEGVMFERRLAAVLTLIEKEINPSKFENITEEEEEKAADRLLFSFLVLVKKLITE
CNLIQLTRNGDVVSSIWNHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKERKS
GKRKKTPAELSASIVFLTAELDKKMKELAFAFCHQLQSKFLDMSLSEQVIKNLLFVAKVL
YLLAPASEEGKEADGELRCEVEEQEVSEDERHTSAQGEEEREDTQEKGQPATLLWLMKKL
SVMVKREAAYSPKVPLKRSCIFKFLGAISVDLGQDRIKPYLPTILTPLYRELNSNYAEQD
PTLKNLSQEIIELLKKLVGLEAFSLAFSAVQKQANQKRAMRKKQRALQTVANPDIAARRK
LKRHKNKAETRKRKIESLRPMYKAKRHRSNALKDLAMVE
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagcccgcggcccacaagtcgggcaacacgcaccggtttcttaccttttcg
gagcgcctaagcaacattaatattgatattattcatcgaattgacagaactgggagctat
gctgaggaggttgaaacctactttttcgaaggactgcggaaatggaaggaactgaacctc
actcggcattttgtgcaattctacaatgaagtggccaacaaatgccagtccttcaaccag
ctggtttattaccaaaatgctattgtgcagagcttgaagacacatttgcaagttgaaggc
agtcttgcttaccaacccctgttaaatctagtggtgcagttggctcgagatcttcaggct
gacttctatcctcactttcatgactttttcctggccatcaccaagttattggatacacag
gacacagagctgttagaatgggcttttacttctctttcctatctctacaagtacttgtgg
agactgatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaactgcacatcagaaactttgctgctgaaagttttgtctttctaatgagaaaggtt
tctgataaaaatgaactcttcaatttaatgctccgtgacctgggagagcaccctgaaaag
gtggaaggtgtaggacagctgctttttgagatgtgcaagggtgttcgaaacatgttccac
tcttgtgcagagacggctatgaagttaattcttatgaagctggggcctatgactgaagaa
gaaattgagctaccatgggtagctgttggagaagccttcaagcaaatgatcagatcagct
gcagtgcatatccataaggagcatttcgacattgtgttcaagtgcctggaggagtcactc
ctagatttgcagaggaaaataacagaggtcaactgcactgtggcttcagagcagatggaa
aggattctgcaagcttatctgatcttagtggaacatgcaaatggatctaaaatctcactg
cctgaagatgtctgtcaggttttaataaaaatgttacagacaccatatctctcatcatct
tgctgcaagatgctgctgaatgccatttcttcattcctgctggcggaaaatgttttgttg
ccagattctttgaccaaggaaactattcagaaggtatttgcaagtagatttgaacggcat
tttcttttggacttctctgaagcaatgttcacaatgaagcaatttgagaggcattttctc
ccatgctttctagaatacattgaacatttcttctctggcacagatgccatcacaaaggat
gaggctgtggcaattctggctaaacttattttggtgaaagcagaacctcctaccattggt
tcaatggcatttgaaaagtatcctcttgttttcactgaagcatctgtcagctctaataca
aggcaacaaacaagtaaaagacaaggagaaaaggcagtagtaccagtgttggatcatgta
ctgtctttaatgcatttaccagagaaggaagacattactgacctttcacaggcttgggtt
gctttggttgtactgccacatattagaccaatgaacaaagaccacattctgcctcatgtg
acaagttttatagactctctcttcacagccattgacaaaggaagtctctgcaaaggaaac
ctatttgtggcctgccaagctgtaagtactctacttagtttggtggaatctgctgaagta
ctccatttgttacctgtggagcgtgtcaagagcttggtgaccactttcccttcagacccc
tctgcattgctgttggctgatctctattacacgaggctggcattgtgtggctgccaggaa
cccctatcccaagggaacctaatggatttgtttgagaagttgcatcctaatatttccact
ggtgtttccaaggtccggctgtcgacggttcgaattctaagccattttgataatccacct
tctgcacagattgagggtgatggcacaggggaattccagccattatttgccatattgctc
caagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctccatttaagg
aaactaagatgtgacatagtgcagcctgcaataccaagtggatctttgcaggaggtgcct
cttcgatatttactaggaatgctttatattaacttcagccctctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggaaaataaacagttctggaaggtcctgtat
gagcatttggagagggctgctagctatgctgaaatggagctacaagatgaattagatgaa
caggaggagagcatagctgaagcagaaagtgagaagataccagaaggagaggtggggact
gtctttctggagcagctgaggagtagaacagattgcagtgaacggctggaccacacaaat
taccgtttcctactttggaaagcactggataagtttccggacagagtggaacctcgatca
agggaactttccccacttcttttgagattcattcgaaatgagtactacccagcagattcc
ttagtggctccatctcaggatctcagaaggaaaattagtggtaccatagcagcaaaacaa
gtatctgctgaagaggtgaatgatgttgctatggaggaggaggaggaggaggaggaggaa
gaagaagaagaaaaggaagaaaggaaaccatttagtataggagtactgaaaaagaaaaca
agaagagctgctgctaagcaactaatagcccatttacaagttttctcaaaattctcaaat
cctcgtgcattgtatctggagcagaagttaaatgccttgtatacccagctactgtctcat
caagaccagaatgtacaaagaatagcacttgactgtataatgacatacaagcatcctcat
ctactgccttacagggagaacttgcaaaggctactggaggacaagagctttaaagaagag
atagtccatttcagtatttctgaggagaccacagtagtaaaaacagagcatcgaccagat
ctcatccctgttcttatgagaattctctatggcagaatgagaaacaaaacagggagcaaa
acacagggcaagtcttcagcgagcactcgcatgtcgatcgtactgcgatttctggccggc
tcgctgccagaagagatacggatgttcttggatctactctttgaagctgtgaagcaattc
agtaatgggccttgccagactgcagtccttcaaagtatgtcagagctggatttagctaaa
gtcctgcctcttgggcgtcagcatagcctcttcaatggtcttgaagttgtgttgaaaaac
atgggacatttgatccagcaatacctgcctgaaattctacagattctactctgcatgact
gctgtggtatcctgcatcctccagcaaagagagaaggtccaacctaggttgattaatcca
ttgaagaatttgagacgtcttggtcttaagcttgtggcagagtttttttctgattatgag
acctacagctttagtacagaagagattgatgcagtattccatgctgtggtatggcctcag
gtctgcagattggcttcagagagtcagtattctccaacttttctgctcaaactcattcac
acctggagtaagaaccccaggtatttccctttgctggccaagcagcagccagatcatcca
gagagtgatatactgacaaatgtttttgctgtgctgtcagccaagaatctgtctgaggcc
acatccagccttgtgatggacattgctgatagccttctcaacagccctgattttgaaccc
acggagcaggtttccagtctgaacgtgactgactgtgttgtcacggccactggagatgtg
acagaagagcccctcagcctaggttgccggttggttctgccccatgttcctgccatactt
cagtacttcagcaaaacaatgttaagtgtggagaaggtgaaaaagaagaagtacagagct
caagtcagcaaagagctgagtatactttccaagatcagcaaattcatacaagaaaagagc
cagaattcagtgcttgtgagccttctccttcctttcctttatcagactaacatggagcag
ggtacacaaattgacattctggagaccgtgcagaacttgctgaggcattgctcaaaccct
acaagctttctcaaaccactggcaaagcttttttctgtcatccagaacaaactgtctcga
aataagttgtgcttggtatttcagactttatctgacttggatgctaagttgaagtatatt
actgatgttgttaagctgaatgcctttgatcagcgacatctggatgatattgacttcgat
gtgcgtctgtcagcatttcagtcaatcacagcccacatcaaggaaatgcaaacagtggat
actgacttcctcatccctgttatgcacaactgcttctataccatccagctcggggatatg
gctcttagtgacaatgcaagcctttgcttgaccagtttcatccaccgactggcagaaatc
agccacacagaagaggagtacaaggagctaatccagcacactctcctggagtctgtgaga
aggggtctgaggagtaagactgagagcatccagcaggactacacatcactgctttcgtgc
ctcattcagacattcccaacaaatcccgaattccaggatttggtccagctgaccaaccgc
catgatcctgacatggacttctttgagaacatgaaacacatgcagattcacaggagggca
cgagctctgaggaaactggcaaagcagctcactgaagaaaagcttgtgctgtcttctaaa
tccctccagaactacatcatgccttatgctacaactgccattttcagtgaaaaaatgctt
aagcatgaaaatatggtaacagcctcggttgaagttgttggagctgtctgccgacatctt
tcatggtcagcatatttgtatcacttaaagcatttcatccatgtcttgcaaacaggacag
atcggtacgaagctgggagtcagcttgttagagatagtgctggaagcttttcactttgac
cataaaacacttgaaaagcaacttgtgaccattgacaatcaagaagctgctgccatggac
cttgagccagtggtggaggctgaagaaaccatggagctggagcagagtgaaggggaagag
gaggaagttgaagaaaagaatgggaagaatctctctgagaagccagtagaacctgagcaa
gcagctgagccatctgaaaatgctgaacaagtgcccaaacctgtttcgttcttaccccaa
aataaagaggagcttcagtgtctgatcaaacacattcaagaaacagttacagtcaacatc
ttgcctaaattgcacaggtgtattgttgcaaaggttaaaagagatgaggagcacaagctt
gtgaaatccaatgttgtgaatgatgatgaggtagttcgtgttccattagcttttgcaatg
gtcagaatgatgcagtctcttccccaggaagtgatggaagctaacctaccaagcatccta
ctgaaagtctgcacattcctgagaaacagatttcaggaaatacgggacattgcccgtaac
accctcattaaaatcatggaagtgttgggagtgcactaccttctgtatatcttaaaggag
atgcggtctgcactcatccatggctaccagctccatgtgctgactttcactgtgaacctg
ttactgaagggccttactaccaggctcagtgctggtgatttggacccctgcttagatatc
ctgattgagattttcaaccaagaattgtttgggaatgtagctgaagagaaagaagtgaag
ggaattgtctccaagatcatggaagcacgcaaaaacaaaagttacgattcctatgaaatt
cttgggaagttcataggaaggagccaagtgacaaaacttattctgccactgaaggagatt
ctggagagcactacaagcttgaagatagtccggaaggtgcatgaggcactgcgtcacatc
atggcagggctgatcttcaactcagacatgaatgcagaatccctcctcctcctcagtcat
ggtctcatcagtgaaaatttgcctctgctcactgagaaagccaagaaaaaagctgcccct
cctccagatcctcgtctgcaaccagagagctgcctgctgctccagcccactcccacaaga
ggagggcagaaagcacgtgtcagcagcaggactaacacatatatcctggttgattcagga
cttcggctgctgcacatgagcctgaagagatccaaagtaaattcctctgaagaacatgct
ttggaaatgttagacccttttgttcagctgcttatagactgcctgaaatctatggatgtc
aaggtgataactggtgctctgcagtccttggtatggattttaaagttccctttgccttct
gtcagtacaaatatggagtcactgatcaagcagcttttcctcttgctgaaagagtttgcc
aagacaggaatagccaaaggccagaatttccacctggttgtgagctgtttcaaatgtgta
acaatacttgtgaagaatgcaaagagtcagataacaagcaaacagctccaagtgttgctt
ggctttgctgaagaagacatttatgattcatcacgacaagccactgcctttggccttctc
aaggctattttatccaggaagctgattgtccctgaaattgatgatgtgctgcagaaggtt
gcccagctagccatcacgggtcagagtgagccagtgcgagtccagtgcaggcagatttac
ttaaaatacattctggattaccctcttggtgacaaattgaaacccaatttggatttcatg
ctcgcacagctggagtatgagtatgaaactgggagggaatccgcactggagattattgcg
tacctccttgacatgttcccacaggatctcctgcacaaacactgtgggctgtttttcctc
tctctttgtatgatgatgataaatgacgactcagccaaatgcaaaaagatggcggctttg
acatgtaaatctcttctccgtaagatcagcagtgaaaaacaagatctgatgttttcgctg
gtcacacaatggtttcacagcaaaaagagctcacacaggaggttggctgcccaggcatgt
ggtttgtttgttgaagtggaaggagtaatgtttgaacggcggcttgcagcagtcctcact
ttgattgaaaaagaaattaacccaagtaaatttgaaaatataactgaagaagaagaggag
aaggctgcagataggcttctattcagctttcttgtgctggtaaaaaagctaatcacagaa
tgcaacttgattcagttaaccaggaacggtgatgttgtgagcagtatttggaatcatgtc
cagtctcacctgtggtatcctcatagttgggtctggctgacagccacggagatctttggt
ttgttgtttgcatcttacaagccagaagatcttgtcaacaaatggaaggaaagaaaatca
gggaagagaaaaaagacaccagcagagctgtctgcatccatagtcttcttgactgctgaa
ctggacaaaaagatgaaggaacttgcatttgcattctgccatcagctgcagtccaagttc
ctggacatgtctctgagtgagcaggttataaagaatttactttttgtggccaaagttctt
tacttgctagcccctgcctcagaagaaggtaaagaagcagatggagaactcaggtgtgaa
gtggaagagcaggaggtctcagaggatgagagacatacttctgctcaaggagaggaagaa
agagaggacacacaagagaaaggccagccagccacactgctatggttaatgaagaagctt
tctgtcatggtgaagagagaagcagcatattcccctaaggtccctttaaagagaagctgc
atctttaagttcctgggagcaatctcggtggatctggggcaagacaggatcaagccctac
cttccaacaattctcactcctctgtacagggagctgaacagcaactatgcagagcaagat
ccaacactaaagaacctatcccaagaaatcatagaacttcttaagaagttagtggggctg
gaggccttttcactggccttttctgctgtgcaaaaacaggccaaccagaaaagagcaatg
aggaaaaaacagagggctttgcagactgtagcaaatcctgacattgctgcaaggaggaag
ctgaagagacacaagaataaagcagaaaccaggaagagaaaaatagaatctctacgccct
atgtacaaggccaagcgacatcgaagtaatgcactgaaagatttagcaatggtggaatga
DBGET
integrated database retrieval system
