Lonchura striata (white-rumped munia): 110483232
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Entry
110483232 CDS
T05897
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110483232 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110483232 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110483232 (NUP153)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110483232 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
110483232
NCBI-ProteinID:
XP_021408620
LinkDB
All DBs
Position
2:66990666..67030255
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AA seq
1448 aa
AA seq
DB search
MASGGGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKSE
DKCVDMNESASEEENPVNYHHDYANEDTMVIDGRVTPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTVLDSTVPHCQPSTSATLGIGSPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSPEAERSHALSQHPASSSKKPAFNLSAFGSPSSSLGNT
SVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQVKAKQANVQSYGVTSS
TARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTNFQSRQNQVDSQHPPVQK
LVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMMEESFPAEKPVKSSESNLS
YPKLDTPASNGLSLGGRMESACGKMRRERERYSASRPAQKQQLEMEQEVLPEVPLPISTA
SLPTFSFSFPTSSAVSSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPLS
QIKFTFSVPVVKSSELSGSTDTPVTSILSPGSATVNSTSNKKEEEEYDGFCKPAKFLKQG
SVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDASKQASSFWQSDTHDP
CLQNKTTDGKCVTCEAAKVSTVEGTKQTISVSPCVSSKATVPTAGTLGFEDKFKPAPNTW
DCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPMVTDNSVTVTSTSSSTGTAVTLGFG
DKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLDLDK
FKMPEGSWECEVCLVQNKAEATKCIACENMKPGTKAELKGFGTATVSTNAAMPSFTFGVP
SSSSESSQTLGSTGDVKFGEQSSFKFGITSESTSSNTVTGGFKFPTGSGNFKFGVSSSDS
KSEDSKKESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSSISSI
ATNENKTGIGGFTFGTVAEKDAASPALPFKKSDEKKDETVSTKGGFSFGSVESAPASQFV
LGRAEEKQDPVTSAGPLAFGKKADSEEIKAQPIFSSGTAEHTKEESTAKPVFNFSFGKPS
EKESEQAKAPFAFGAPTSTCDQGASFSFLSSSSSNTVVPTTSANSSSVFGSSLSSSNPQP
VPTPFVFGQPSNTVTSSVFGNPAESATSQSFGFSQENKPATTSSSTGSTLTPFLFRSGES
STNAANSGFTFGATTTSNSTGSSSSFLFGSGPPAPAAGSAFGTSQLPAFGPSPGSSQQSA
PSFGSLSTTLFSAGSHPAPSAFGSVTSSTQPSVFGQQAAHQPAFGSGTPSAGSVFQFGSN
TTNFSFPNNPGVFTFGANPPASAAPGTSGFSFNQPPTFTVGTNGKNVFSASGSSVPGRKI
KTAIRRRK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcggcggcggcggcggcggcaagatccggacccgacggcaccacctg
ggagccgccaagccgccctacgcgaggggcaagcagcagctgggactccttagcagagtg
actgaatcagtgaaaaacattgtaccaggatggctgcagaagtatttcaataaaagtgaa
gataaatgtgtagatatgaatgaatctgcaagtgaggaagagaatccagtaaactatcac
catgattatgcaaatgaagataccatggtaattgatgggagagtcacgcctgaatcagca
agaattaatttagaagaaccatccacgagcaggtctgcgctgaacttctcggatgtgtta
acaaggccctcccttcaccggagccatttgaactgcaccgtgctggattccacagtccca
cactgtcagccctccacatctgccacacttggcatcggcagtcctgggctgtccctcgta
aaggaaataaaagattctacctctcagcatgacgacgataacatctcaacaaccagtggc
ttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcaccactg
ctttggtccccggaggctgaaagatctcatgccctctcacagcatcctgcatctagctct
aaaaaacctgcattcaatttgtctgcttttggatctccctcttcttcacttggaaacact
tctgtctttaagacaagacagcttggggattctccattttacccaggaaagacctcttat
ggtggtgcagctgcagcagcgagacagacaaaagtccagatttctgcttaccagccaccg
ataaaaagacaagtgaaagctaaacaagcaaatgtgcaatcctatggtgtgacaagttcc
acagcacggcgcatcttgcagacattggagaagatgtcaagccctttggcagatgctaaa
aggattccatcttctgtttctagtccgctgtcttctcctgtggacaggagtgtgctgaat
gtgactaatttccaatccagacaaaaccaggtggactcacaacatcctcctgtccagaaa
cttgtgacaccaaagccaatctccctgacagggagtcggatcacatattttaaaccatct
ctgaaatcagctactaattccagaaaaattcaccaaagggtagatacggaccatcaagac
atgatggaggagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaatttgagc
taccccaaactcgatactcctgcatccaatggtctgtctttgggaggtaggatggagagt
gcctgtggcaagatgagaagggaaagggagcgatactctgcatcaagacctgcacaaaaa
caacaactggagatggagcaagaagtgctacctgaagtacccctgcccatcagtactgca
tcgctgccgacgttcagcttcagtttccctaccagtagtgctgtctcctcatcacccagc
attgtttcaaaagcagtgatgaacaaggtacaaccagcgagtaatgttggcagtcctaca
tttgtattttcatctccaattgtgaaatctactgaggtggaagtgctacctcccttgtct
caaattaagtttacatttagtgttcctgtcgtaaagtcatcagagctttctggatccact
gatacaccagtgacatccatccttagtccaggtagtgccactgtaaacagcaccagcaat
aagaaggaagaagaagaatatgatgggttctgcaaacctgctaagttcttaaagcaagga
agtgtgttggacattctaaaaagccccggctttatgtctgggaaatcaccctcctgttca
tctgcacagcctgttacgagcacagtggtctatacaaggcctgcaataagtagtttttct
gcaggtaaagacgcctctaaacaagcatcctcgttttggcagtctgacacacatgacccg
tgtctgcagaacaaaaccacagatggcaaatgtgtaacatgtgaagctgctaaagtgtcc
actgttgagggtacgaagcaaacgatcagtgtgagtccatgtgtctcctccaaggcaaca
gtccctacagcagggacgctgggctttgaagacaaatttaaaccagcacccaacacatgg
gattgtgatacctgtctggtccagaacaaacctgaagctacgaagtgtatagcatgtgag
acaccaaagcctggaactggagtgatgcctgctctcacaatgccaatggtcacggacaac
tcggtgacagtgacatccacctccagcagcactggcacagcagtcactctggggtttgga
gacaaatttaaacagccaaaaggctcttggaactgttcagtgtgccttctacaaaataag
gcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtgcctgtg
accagtagcagtgtttctgcattttctgcttcttctggaggttttctggatttagacaaa
ttcaagatgcctgaaggaagttgggaatgtgaggtctgcttagtccaaaacaaagcagaa
gccacaaaatgcatagcctgtgaaaatatgaagccaggcaccaaagcagagctcaaaggt
tttggtactgctactgtgtctacaaatgctgcaatgccatcatttacatttggtgtcccg
tcatcatcctctgaatcttcgcaaacattaggtagcacaggagatgttaaatttggagaa
caaagtagctttaagttcggcatcacatccgaatctacatcatctaacactgtgactgga
gggtttaagtttcctactggttcagggaacttcaaatttggagtttcttcctcagactct
aaatcagaagatagcaaaaaagaaagtaaaagtaacagttttaccttcggacttccatct
acaagcagtcaggctccttcaacatttcagtttggaacgacgagtctgggacagcaggaa
aagaaagaggaaccagttttgggaggatttggttttgctacaagttctatttcttccata
gctactaatgagaataaaactggaatcggtggcttcacttttggaactgtggcagaaaag
gatgcagcatcacctgctttgccatttaagaagtcagatgagaaaaaggatgaaactgtt
tcaacaaagggaggtttctcttttggtagtgtggagtctgcacctgcctcacagtttgtt
ttgggaagggcagaagagaagcaagaccctgtcacttctgctggtcctttagcatttgga
aagaaagctgacagtgaagagataaaggcacagcctatcttttcatctgggacagctgag
cataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaaccatca
gaaaaggaaagtgagcaggcaaaggcaccttttgcctttggagcaccaaccagtacctgc
gatcaaggagcatccttcagcttcttgagctctagttcctccaacacagtggtacccacc
acttcagccaacagcagcagtgtgtttggcagcagcctctcttcctcaaaccctcagcca
gttcccactccctttgtgtttggacaacccagcaacactgtgaccagctctgtttttggc
aatcctgcagaatctgcaacatctcagtcatttggcttctctcaagagaacaaaccagca
accacatcttctagcactggctcgactcttactccatttctctttcgttcaggagagagc
agtacaaatgcagcaaattcaggatttacttttggagccacaactacatcaaattcaaca
gggtcatcgtcttcatttctgtttggctctgggcccccagcgcctgctgctggctcagcc
tttggcaccagtcagttaccagcatttggcccaagcccaggctccagccagcaaagcgct
ccaagttttggatcgctgtcgacaacgttgttttctgctggctcccaccctgctccttct
gcattcggctcggtgacaagcagcactcagccctctgtgtttggacagcaggcagcccat
cagccagcttttggctctggtacccccagtgctggttctgtattccagtttggaagcaat
actactaatttcagctttccaaataacccaggagtattcacttttggtgcaaatcctcct
gcatcagccgctcctggcacttcgggattttcgttcaaccagcctccaacatttacagtg
gggactaatgggaaaaatgttttctctgcctctggatcttcagttcctggtcggaagata
aagactgcaattagacgtagaaagtaa
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