Lonchura striata (white-rumped munia): 110483276
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Entry
110483276 CDS
T05897
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110483276 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Other domain-containing proteins
Patched domain-containing proteins
110483276 (PTCHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
110483276
NCBI-ProteinID:
XP_021408697
UniProt:
A0A218VCS4
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All DBs
Position
1:complement(13947469..13986143)
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AA seq
914 aa
AA seq
DB search
MVLRGPWGSCGGPGAALALLRALRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTDDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgagggggccgtgggggagctgcgggggccccggcgcggcgctcgctctcctg
cgcgccctccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcctcggcacccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaggagagcgtggagcac
ctcctggcccccacgcacagcctggccaagatcgagaggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgcctgggaggtacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacactgatctc
atcctcaagttgcactctgcagtgaccaggatccaagttcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtactggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtataatgggcatcagctcggtggg
gttactgtgcacagcaaggaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagagaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttcc
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgacagtgacccttgccaccctgactgct
gctgggatcatcaatctcactggtgggaaatacaattccaccttcctgggaatccccttc
gtcatgttaggtcatgggttgtatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacatgttaaagagaggactgcagctgtatttgcagactccatgctctcg
ttttctctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaactcctgtattgcaattttcttcaactac
ctctatgtactttccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagtgaggacacggatgattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttcctgaaacgctattattgtgactgg
ataacaaacacttacgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaggggtcagacctgagcaacatcgtagcgact
gcgactcggaccatcgagtacacgactgcccagcagaagtatttcagtaactacagcccg
gtcattgggttctacatctacgagtcaatcgagtactggaacaccagtgtccaggaggat
gtgttggagtataccaagggctttgtgaggatatcttggttcgaaagctacttaaattac
cttaggaaactcaacatatctactggattgccgaaaaagaatttcactgatatgttgagg
aactccttcctgaagacccctcagtttgcccatttttcagaggatatcatattttccaag
aaatacaacaatgaagttgatgttgtggcctccaggatgttcttggtggccaagacaatg
gaaaccaagagggaagaactttatgacctcctggagaccctgaggaagctctctctcacc
tccaaggtgaaattcatcgttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaatgtctggctcactctaactgttgcctcggtt
gaatttggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttaatttacggaattaattatacaattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctctcgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatactgactttcctgccaccctccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcacccgagtggttgaccaaattacaacagtctaa
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