Lonchura striata (white-rumped munia): 110483350
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Entry
110483350 CDS
T05897
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04517
IgSF CAM signaling
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110483350
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110483350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110483350
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110483350
Intermediate filaments
Intermediate filament-binding proteins
110483350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
110483350
NCBI-ProteinID:
XP_031363625
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MRSCPNISPTSHDEFWGPTLPLTPLQREGEELLQAKPELSGAVRRQLEELRRCWQELETT
SQARSWRLAEAAAAERLARSFADVEARLGHLEEQLENVGGGADLRSVSHQLKRLQSMESQ
VEEWCREVGELQAQAAALPAQAAGREEVGERQSAVGTRIVRLIEPLKERRRILLASKEVH
QVSHELEDEVMWVQDRLPLATLKDHGTNLQTVQQLIKKNQNLRREIQARRPRVDEVLERA
AAVACVESPEAEVARGLLGRLATAWAELQEQAERRQQALDASYQLQQYLFDVAEVEAWLG
EQELLLMSEEKGKDEQSTLQLLKKHLLTEQTIENYEETIAQLSRQCRALLELGHPQSEQV
SRRQSQVDRLYVSLKELLEERKVQLEQQYWLYQLNREVDELEHWIAEKELVAGSPELGQD
FEHVTVSAVRDGRRRAGRRPRWRSCGEVLTSGVVVRVLENFVETSWWFWHLLGGSGTSLV
IWHHPGAPETILVVLTPSWWSWHLIGGPGTSWWSWHHPGGPDTILVVLVLSWVFWHLLMA
LAPPWWSWHLLVLLTPSWWSWHLLVVLAPSWWPWNLLVILKPFWWSWYYPGGHGTILVVL
ALLGGPGSVSCPTIDPRTRFWFFTGSVSCPTMHPRTRFWFFTGSVSCPTIDPRTRFWFFT
GSVSCPTIDPRTKSSSITRRTPHPSPCQCPLLATKDPCPCPPLSSPRPRDVSSVELLMND
HQSLKTEMEAQAKNVDTCLELGKTLILSKSPAADEIKSNMEKLLEKKKEMTEKWDKHWEW
LQQKREVQQFAQEAVVADAWLTAQEPLLTSQELGSSVDEVEQLIRRHEAFRKAAAAWEER
FSSLRRLTTIEKLKAEQSKQPPTPLLTRKFPPEPPPAGAAARRPEPRVAYVRHELRPERL
QPQLDRVRPPATAAGGAEEPPPATGVTAEATEAEEPGEVRPGPPERRRERRERRLERQES
SEPEAPRHDGKSGGSKATLADIVEQLQEKEAGGAVPASPRDRDSPARLPAGPEALPERTP
RPERPRARDRPRPRRRPRPRDSAQGAAEPRRSRSAPAQGSAPPPPPPPAHTVTHEGFLLR
KHELDGAGKKASNRSWVNLYCVLAKGDLGFYKDAKGPAAGATHGGEPLLSLHRAASEVAN
DYKKKKNVFKLKTGDGGWLRALAASAQEHAELARWQQGLLTTSSTDEGLPRRDPDRPRRK
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctgccccaacatctccccaacatctcacgatgaattttggggtcccaccttg
cccctaacccctctacagagggaaggtgaggagctgctgcaggccaagccggagctgagc
ggggcggtgcggcggcagctggaggagctgaggagatgctggcaggagctggagaccacg
agccaggcgcggagttggcgcctggccgaggcggcggccgccgagcgcctggcgcggagc
ttcgccgacgtggaggcgcggctgggccacctcgaggagcagctggagaacgtgggcggc
ggcgccgacctccgcagcgtcagccaccagctcaagaggctgcagagcatggagtcgcag
gtggaggagtggtgccgggaggtgggcgagctgcaggcgcaggcggcggcgctgccggcg
caggcggccgggcgcgaggaggtgggcgagcggcagagcgcggtggggacgcgcatcgtg
cgcctcatcgagcccctcaaggagcggcgcaggatcctgctggcctccaaggaggtccat
caggtcagccacgagctggaggacgaggtgatgtgggtccaggaccgcctacccttggcc
acgctgaaggaccacggcaccaacctccagaccgtccaacagctcatcaagaagaaccag
aacctgcggcgggagatccaggcgcgccggccccgcgtggacgaggtgctggaacgcgcc
gccgccgtcgcctgcgtcgagagccccgaggccgaggtggcgcggggcctcctggggcgg
ctggccaccgcgtgggccgagctgcaggagcaggccgagcggcggcagcaggccctggac
gcctcctaccagctgcagcagtacctcttcgacgtggccgaggtggaggcgtggctggga
gagcaggagctgctgctgatgagcgaggagaaggggaaggacgagcagagcaccctgcag
ctcctcaagaagcacctcctgaccgagcagaccatcgagaactacgaggagaccatcgcc
cagctctcccgccagtgccgcgccctcctggagctcggccacccccagagcgagcaggtg
agccggcggcagtcgcaggttgaccgcctctacgtgtctctgaaggagctgctggaggag
cgcaaggtccagctggagcagcagtactggctctaccagctcaaccgcgaggtggacgag
ctggagcactggatcgctgagaaggagctggtggccggctcgcccgagctgggccaggac
ttcgagcacgtcacggtgagcgcggtgagggacgggcgccgccgcgctgggcgacgcccg
cggtggaggtcgtgcggggaggttctgacgagtggtgtcgtcgtgagggttctggagaac
ttcgtggagacatcttggtggttctggcacctccttggtggttctggcacctccttggtg
atctggcaccatcctggtgctcctgagaccatcctggtggtcctgacaccatcctggtgg
tcctggcacctcattggtggtcctggcacctcctggtggtcctggcatcatcctggtggt
cctgacaccatcctggtggtcctggtattatcctgggtgttctggcatctcctgatggcc
ctggcacctccttggtggtcctggcacctcctggtgctcctgacaccatcctggtggtcc
tggcacctcctggtggtcctggcaccatcctggtggccctggaacctcctggtgatcctg
aaaccattctggtggtcctggtattatcctggtggccatggcaccatcctggtggtcctg
gcactccttggtggtcctggttctgtgtcctgtcccaccattgacccaaggaccaggttc
tggttcttcacaggttccgtgtcctgtcccaccatgcacccaaggaccaggttctggttc
ttcacgggttctgtgtcctgtcccaccattgacccaaggaccaggttctggttcttcaca
ggttctgtgtcctgtcccaccattgacccaaggaccaagtcctcgtccatcacaaggagg
accccacacccttccccatgccaatgtcccctcctggccaccaaggacccctgtccatgc
ccaccgttgtcctccccccgccccagggacgtgtcgtcggtggagctgctgatgaacgac
caccaaagcctcaagactgagatggaggcccaggccaagaacgtggacacctgcctggag
ctgggcaagaccctcatcctcagcaagagcccggcggccgatgagatcaaatccaacatg
gagaagctcctggagaagaagaaggagatgacggagaagtgggacaagcactgggagtgg
ctgcagcagaagcgcgaggtgcagcagttcgcgcaggaggccgtggtggccgacgcgtgg
ctgacggcccaggagccgctgctgacgagccaggagctgggcagcagcgtggacgaggtg
gagcagctgatccggcggcacgaggccttccgcaaggcggcggccgcctgggaggagagg
ttcagctccctgcggcgcctgaccacgatcgagaagctcaaggccgagcagagcaagcag
ccgccgacgccgctcctgacgcgcaagttcccgccggagccgccgccggcgggcgccgcc
gctcgccggccggagccgcgcgtcgcctacgttcggcacgagctgcgcccggagcgcctc
cagccccagctcgaccgcgtccggccgccggccaccgccgcaggaggagccgaggagccg
ccgccggccaccggtgtcaccgccgaggccaccgaggccgaggagcccggcgaggtccgg
ccggggccgccggagcggcgccgggagcgccgggagcgccggctggagcggcaggagtcc
agcgagccggaggcgccgcggcacgacgggaagagcggcggcagcaaagccaccctggcc
gacatcgtggagcagctgcaggagaaggaggcgggcggcgccgtgccagcttcgccccgt
gaccgcgactctcccgcccgtctccccgccggtcccgaggcgctcccggagaggacccct
cggccggagcgtccccgggcgcgggaccggccgaggccgcggcgccggccgcgcccccgg
gactcggcgcagggcgcggcggaaccgcggcgctcgcgctcggcgccggcgcagggcagc
gcgccgccgccgccgccgccgcccgcccacacggtgacgcacgagggcttcctgctgcgc
aagcacgagctcgacggcgccggcaagaaggcgtccaacaggtcttgggtgaacctctac
tgcgtcttggccaagggcgacctgggcttctacaaggacgccaaaggtcccgcggccggg
gccacccacggcggggagcccctgctgagcctgcaccgcgccgccagcgaggtggccaac
gactacaagaagaagaagaacgtcttcaagctcaagaccggcgatgggggctggctgcgg
gcgctggccgccagcgctcaggaacacgccgagctggcccggtggcagcaaggcctcctc
accacctcctccaccgacgaggggctcccccggcgcgaccccgaccggccccggcggaag
tga
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