Lonchura striata (white-rumped munia): 110483435
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Entry
110483435 CDS
T05897
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110483435 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110483435 (NHLRC1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110483435 (NHLRC1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110483435 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
RING_XB3-XBAT31
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110483435
NCBI-ProteinID:
XP_021409042
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All DBs
Position
2:complement(68733940..68738127)
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AA seq
384 aa
AA seq
DB search
MAAEDEAELSLLECRVCFEPYGPDGQRRPLNLPCGHVLCRGCVGALAGAERQRLECPFCR
RLWGPAETSDCLPLLQLLELLRPAGRGLASALGGGGGGAAAPAGLGLRLCLGGWGSLVNP
TGVAACPGPGGLAVAHDGKKRIHVFGPSGFCLRRFGERGGASNDIKYPLDVTVTSDGHVV
VTDGGDCSVKAFDSEGRGVLAVREGFRLPWGLDASPRSEVILTDSEAGALYRLAADFQRG
ELKKCQMIRSQLVSPRAVAVCPTSGAVVVIEHLRPRGPSKGSTRVTILSAEMDLIGQVDS
FGLNLVFPSRIYATAVAFDREGRVIVTDVCSQAVICLGKPEEFPIFNPLISHGLAYPVGL
TYTADDSLVVLDSGDHSVKVYSST
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagccg
tacggccccgacggacagcggcggccgctcaacctgccctgcgggcacgtcctctgccgg
ggctgcgtgggggccctggccggcgccgagcgccagcggctggagtgtcccttctgccgg
cggctctggggccccgccgagaccagcgactgcctcccgctgctgcagctgctggagctg
ctgcgccccgccggccgcggcctcgcctcggccctgggcggcggcggcggaggggcggcg
gcccccgcggggctcgggctgcggctgtgcctggggggctgggggtcgctggtgaacccc
accggcgtggcggcctgccccgggccgggcggcctggcagtggcacacgacggcaagaag
aggatccacgtcttcgggccgagcgggttctgcctgcggcggttcggggagcgggggggc
gcgagcaacgacatcaagtatccgctggatgtgacggtcacgtcggacgggcacgtggtg
gtcaccgacggcggggactgctccgtgaaggctttcgattctgagggaaggggagtcctg
gctgtccgggaaggcttccgtctgccctggggcttggatgcctcccccaggagcgaagta
atcctgaccgactcggaagcaggcgcgctgtaccgcctggcggccgacttccaaaggggg
gaattaaagaagtgccagatgatccggtcccagcttgtcagccccagggcggtcgcagtc
tgccccacctcgggtgctgtcgtggtgatagagcacctgagacctcggggaccgagcaag
ggcagcacccgagtgaccatactcagtgcggagatggatctcatcggccaggtggacagc
ttcggtctgaacctcgttttcccctccagaatatatgccacggctgtggcctttgacaga
gaaggtcgtgttatagtaacggatgtttgtagccaggctgtcatatgcttgggaaaacct
gaggaatttcccatctttaatcctctaattagccacgggcttgcttatcccgttggactg
acttacacggcagacgattccctcgtcgttttagacagcggtgatcattcagtgaaagta
tatagctctacctga
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