Lonchura striata (white-rumped munia): 110483444
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Entry
110483444 CDS
T05897
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110483444 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110483444 (TRIP13)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
110483444 (TRIP13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_18
AAA_14
AAA_5
RuvB_N
IstB_IS21
AAA_25
AAA_28
NPHP3_N
Cytidylate_kin
AAA_24
bpMoxR
TsaE
ATPase_2
NACHT
RNA_helicase
AAA_30
AAA_33
ABC_tran
DUF815
AAA_7
AAA_11
AAA_17
TIP49
PduV-EutP
AAA_RNF213_4
Rad17
Mg_chelatase
AAA_19
PhoH
SLFN-g3_helicase
NB-ARC
AAA_3
nSTAND6
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
110483444
NCBI-ProteinID:
XP_021409057
LinkDB
All DBs
Position
2:complement(73056141..73068266)
Genome browser
AA seq
432 aa
AA seq
DB search
MEDAAGDLKQALPNVCDGVQIHVEIHQKSSSVAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDPFLNNNVQSVAIVDTELKLKDRQPIDLSTRTLSLHIFHLNEEGPTSENLEEENEDIT
AAHHWMLPAAEFHGLWESLIYDTEVKSNLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELV
DDRDALVFVLIDEVESLTAARSAFRAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSRLSLVLKEISRKSEGLGGRVLRKLPFLAHALYIQSPSVTMSTFLQALSLAVDK
QFEEKKNLADCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgctgctggggatttgaagcaagcgctcccaaatgtgtgtgacggcgttcag
atccatgtggaaattcaccagaagtcgagcagtgtggccaagaaagaagatattaggatg
agtgtcttaaagctgttgaacagacacaacattgtgtttggtgattacaagtggacagag
tttgatgaccctttccttaacaacaacgtgcagtctgtggcaattgtggatacagagctg
aaactgaaggacagacagcctattgacctgagcacaagaactctttctcttcatattttt
catctgaatgaagaaggaccaacctctgaaaatcttgaagaagagaatgaggatatcact
gcagctcaccactggatgctaccagcagctgaattccatggcctttgggaaagtcttatc
tatgacactgaagtaaaatcaaatctacttgattatgtgacgacgacattattattttcc
gacaaaaatgttgacagcaacctgatatcatggaacagagttgttttgctgcatggccct
cctggaactgggaagacttctctctgtaaagcattggctcagaagctgacaattcgactg
tcatacaggtataggtacggacagttaattgagataaacagccatagccttttctctaag
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagatccaagagttagtt
gatgaccgagatgctcttgtgtttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcagggcaggcacagagccttcagatgctattcgtgtggtcaatgctgta
ctgacacaaatagaccagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacagaaaaaattgacatggcctttgtagacagggctgacataaaacaatacattgga
cctccatctactgcagcaatatttagaatatatctttcttgcctggaagaactgatgaag
tgtcaaataatatatcctcgacagcagcttctgacactcagagagcttgagatgatcggc
ttcatagaaaataatgtgtcaaggttaagccttgtactaaaagaaatctcaagaaaaagt
gaaggtcttggtggccgggtcctgagaaagcttcctttcctagcacatgcactttatatt
caatcccccagtgtcacaatgtcaacttttcttcaggccctttcacttgcagtagacaaa
caatttgaagaaaaaaagaatcttgcagactgcgtgtga
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