Lonchura striata domestica (Bengalese finch): 110483448
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Entry
110483448 CDS
T05897
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110483448 (SOX4)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110483448 (SOX4)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110483448
NCBI-ProteinID:
XP_021409060
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Position
2:70145289..70148991
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AA seq
432 aa
AA seq
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MVQQTNTAENTEALLAAETSDSGAGIELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNSSAKPGDKADKGGGGGAGGGSAGGGSGGPAASAKPAPKKGGG
GGSKPSPAGGGAAAGGKPHGKAAGGKAAPFPGEPSAALLPPEHQALYKPRGAASAPSGPG
KPLAEKKLKRVYIFGSGQAAAASASPGGAVPGSPTLSSSAEAGDPLSLYEEGGGSAGRPD
GDCGGVACPSPSGSGSPSDHRSYTSLRSSSPAPSTAHSSSASSHSSSSSSSGSSSSDDEF
EDDLLDLNPSPGFESMSLGSFSSSVLDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDW
LESSISNLVFTY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagaccaacacggcggagaacacggaggcgctgctggccgccgagacctcc
gactctggggccggcatcgagctgggcatcgcctcctctccgacgccgggttccaccgcc
tccacggggggtaaggcggatgacccgagctggtgcaagacacccagcgggcacataaag
cggcccatgaatgccttcatggtatggtcacagatcgagcggcgaaagatcatggagcag
tcccccgacatgcacaacgccgagatctccaagcgcctgggcaagcgctggaagctgctc
aaggacagcgacaagatccccttcatccgggaggcggagcggctgcgcctcaagcacatg
gcggactaccctgactacaagtaccggcccaggaagaaggtgaagtcgggcaacagctcc
gccaagcccggcgacaaggcggacaagggcggcgggggcggcgccggcgggggcagcgcg
ggcggcggctccggcggccctgcggcctccgccaagcccgccccgaagaagggcggcggc
ggcggctccaagccctcccccgcgggcggcggcgcggccgcgggcggcaagccccacggc
aaagcggcggggggcaaggccgccccgttccccggggagccgtcggccgcgctgctgccg
cccgagcaccaggcgctctacaagccccggggggcggcgagcgcgccctcgggacccggc
aagccgctcgccgagaagaagctgaagcgggtctatatcttcgggagcgggcaggcggcg
gctgcctccgcctcccccggcggcgccgtgcccggcagccccacgctgagcagctcggcg
gaggccggcgaccccttgagcctctacgaggaggggggcggcagcgcgggccggcccgac
ggggactgcggcggcgtcgcctgcccgtcgccctccggctccggctcgccctcggatcac
cgcagctacaccagcttgcgctcctcctccccggccccctcgacggcgcattcctcctcc
gcgtcctcccactcctcctcctcttcctcctccggctcctcttcgtcggacgacgagttt
gaggacgacctcttggacctgaaccccagccccggctttgaaagcatgtccctgggcagc
ttcagctcctcggtgctcgaccgggacctggattttaacttcgagcccggctcgggctcg
cactttgagttcccggactattgcacgccggaggtaagtgagatgatctcgggggactgg
ctggagtccagcatttccaacctggtcttcacttactga
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