Lonchura striata (white-rumped munia): 110483454
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Entry
110483454 CDS
T05897
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110483454 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110483454 (CTDP1)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110483454 (CTDP1)
Protein phosphatases and associated proteins [BR:
lsr01009
]
HAD phosphatases
Fcp/Scp phosphatases
110483454 (CTDP1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110483454 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
110483454
NCBI-ProteinID:
XP_021409075
UniProt:
A0A218V0D1
LinkDB
All DBs
Position
2:72408179..72504043
Genome browser
AA seq
871 aa
AA seq
DB search
MKGLCAECGQDLTQIRSKYGKQSVPLSTATVSMVHSVPELKVSSEQAEQLGREDQQRLHR
NRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKL
YELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCGDSMVC
IIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREMQMKKKASHSTKPEALDSAVIS
AKDVEEIQNVICAEEHSNGLKKTAKDTCIANGSTPVSSETSDGDVNSHNKVNAQDSLNDS
IGHRMDGKVTDDLTNTKECQIFSEQIDTTVTEKQQTQEKINDLDFELSSDSESDDGLDSK
KSSTSVSDSENEEKRSWKKSKQPLQDENLQQESCTDTSEKKFGLVNRSGDTQSLPSENIQ
EKIDHEAQEESEQESLCDLGNGSGDKKEAETESQISEQSGITMGESLDQSMEEEEEEDDT
DDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTIIFSGL
YPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQDCKDLH
VVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTPSTFQTALFHPTPIHPK
SQPGPEVRIYDPNTGKLIRKGTQTSGQSMYIQSPAPPITLPVHGEHSSFRVVQPHQQQMF
EEDDLPGSENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDESDTE
KKKTEEEGEKPQTCATETLGRKSDQRPGSSSSSSSERSLTGSVPRGHKRKLDEDDAASES
SKESSNEDEEGSSSEADEMAAALEAELNHFM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttatgtgcagaatgtggccaagatttaactcagatacgaagcaagtatggg
aaacagagcgtgccattatccacagcaactgtatcaatggttcacagtgtcccagaactg
aaagttagctctgagcaagctgagcagctgggaagagaagatcaacagcgactacatcga
aatagaaaactggtgcttatggtagatttggaccagacattgatccatactacagaacag
cactgccagcaaatgtccaataagggaatatttcatttccagttaggtcgaggtgagcct
atgttgcacacacgtttgcgtcctcattgtaaggaattcctggaaaaaattgccaagctc
tatgaattacatgtttttacttttggcagcagactgtatgcacatacaattgcaggattt
ttggaccctgaaaagaagcttttttcccatcggatattgtcaagggatgaatgtattgat
ccattttctaaaactgggaaccttagagatctttttccttgcggagattccatggtctgc
atcattgatgatagagaggatgtttggaagtttgcacccaatttgataactgtgaagaaa
tatgtatactttcaggggataggagatattaatgcacctcctggatcaagagaaatgcaa
atgaagaagaaagcaagccactctacaaaacccgaagcattggattcagcagtgatttca
gcaaaagatgttgaagaaatacagaatgttatatgtgcagaagaacacagtaatggtctc
aagaaaactgcaaaggacacttgcattgcaaatgggagtactcctgtaagcagtgaaaca
tctgatggggatgtgaactctcataataaagttaatgcccaggactccttaaatgatagc
attggtcacagaatggacggcaaggtcactgatgatttgacaaacacaaaagaatgtcag
attttttcagaacaaattgatacaacagttacagagaagcagcaaacccaagagaagata
aatgatttggactttgaactatctagtgacagtgaaagtgatgacggattggatagcaaa
aagtcatccacttctgtatcagatagtgagaatgaggaaaagagaagttggaagaaatcc
aaacaacctctgcaggatgaaaatttgcagcaagagagttgtactgatacgagtgagaaa
aagtttgggctggtgaaccgttctggggacacacagtctttacctagtgaaaatatccag
gaaaaaattgatcatgaagcacaagaggaaagtgaacaggaaagcctttgtgatttagga
aatgggtctggagacaagaaagaagctgaaacagaatctcagattagtgaacagtctgga
attacaatgggtgagtccttagatcagagcatggaggaggaagaggaagaagatgataca
gatgacgatgaccatttaatataccttgaggaaatccttgtgcgagttcacactgattat
tacacaaagtatgataaatacctgaaaaaagagattgaggaaattccagacatcagaaaa
atagtaccagaactaaaaagtaaagtcttggcagatgtaaccataatatttagcggactc
tacccaacaaacttccctattgaaaagacacgggaacactatcatgccacagcacttgga
gctaaaattgtgaagaatctcgtacttagtgctgatgatcctgataaagcaacacatcta
attgcagcaaggacaggcacagaaaaagtacggcaagctcaggactgcaaggatctccat
gttgttaaccctgactggttgtggagctgcctagagcgctgggacaaggttgaggaacag
ctctttcccttaaaggatgactacatcaaaacacacagagaaaacagccctgccacattt
cctgatacacccagcacatttcagactgctctgtttcacccaacacctatccatccgaag
tctcaacctggtcctgaagttcgaatttatgatcctaacactggaaagctcatcaggaaa
ggcacacagacatctgggcagtcaatgtacatccaatctccagctcctcccatcactttg
ccagtccacggtgaacactcatccttcagagttgttcagccacatcaacagcagatgttt
gaagaagatgacctaccaggaagtgaaaatgaagagcagcctggtccatctaagaggaaa
cgccagccaagtatgtctgaaacaatgcccctgtacactctatgtaaagaggatttagaa
agtatggataaagaggtggatgacatcttaggagaaggcagtgacgaaagtgatactgaa
aaaaaaaagacagaagaggaaggtgaaaaacctcagacttgtgcaacagagactctaggg
aggaagtcagatcagagacctggatcatcatcgtcgtcatcaagtgaaagaagcttaaca
ggcagtgtacccaggggtcacaagcgcaaactggatgaagatgatgctgccagtgaatcc
agtaaagaatccagcaatgaagatgaggaaggaagcagttctgaagcggatgaaatggca
gcagcacttgaagctgaactgaaccacttcatgtga
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