Lonchura striata (white-rumped munia): 110483574
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Entry
110483574 CDS
T05897
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1
KO
K14298
mRNA export factor
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110483574 (RAE1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110483574 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110483574 (RAE1)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110483574 (RAE1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110483574 (RAE1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110483574 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_SPT8
PepSY
Motif
Other DBs
NCBI-GeneID:
110483574
NCBI-ProteinID:
XP_021409236
UniProt:
A0A218V0F2
LinkDB
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Position
20:complement(6669461..6677070)
Genome browser
AA seq
368 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcggatcaacgtccggattcggtaccggcggtaccagcatgttcggcagc
acgacagcggacaaccacaacccgatgaaggatattgaagtgacatctccacctgatgac
agcatatcttgtttagcatttagtccaccaacgctgccgggtaatttcctcattgcagga
tcatgggcaaatgatgttcgctgctgggaagttcaggataatggacagacaattccaaag
gctcagcagatgcacacagggcctgtactagatgcctgctggagtgatgatgggagtaaa
gtatttactgcttcttgtgataaaactgccaaaatgtgggatctcaacagtaatcaagca
attcagattgctcaacatgatgctcctgtgaagaccatccattggattaaagcaccaaat
tacagctgtgtgatgacaggaagctgggataaaactttgaagttctgggatacccgttca
ccaacacctatgatgacactgcagctccctgaaagatgttactgtgcagatgtggttcat
cctatggcagctgtggccactgcagaaaggggtttgatagtttatcagttagagaaccaa
ccttctgaatttagaagaatagaatctcccctgaagcaccagcatcgctgtgttgctatt
ttcaaagacaaagtgaacaaaccaactggctttgcccttgggagcattgaaggcagagta
gctattcattatatcaaccccccaaaccctgcaaaagataatttcacttttaaatgccat
cgctccaatggaacaaacacatcagcacctcaggacatctatgctgttaatgggattgca
ttccaccctgtccatggtactctggccacagtagggtctgatgggaggttcagcttttgg
gataaagatgcacggacaaagctaaaaacctcagagcagctggaccagccaatatctgct
tgttgtttcaaccacaatggcaatatatttgcttatgcttccagctatgattggtcaaag
ggtcatgaattctataatccacagaagaaaaactacatttttctgcgaaatgcagcagaa
gagctgaagcccaggaataagaagtag
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