KEGG   Lonchura striata (white-rumped munia): 110483587
Entry
110483587         CDS       T05897                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04510  Focal adhesion
lsr04512  ECM-receptor interaction
lsr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110483587 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110483587 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110483587 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lsr00535]
    110483587 (COL9A3)
Proteoglycans [BR:lsr00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   110483587 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 110483587
NCBI-ProteinID: XP_031362432
LinkDB
Position
20:complement(3986927..4015271)
AA seq 635 aa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NT seq 1908 nt   +upstreamnt  +downstreamnt
atgaggctgagccagggagagccaggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagctgcaggtgaagctggattgcctggtctgcctggagtg
gatggtttaacaggagctgatggcccacctggcccaaatgggcctccaggagaccgtggt
gcattaggacctgctgggccacctggaccagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccagggggacatggatttcggggcccttctggacctttt
ggtctgccaggattcccagggcctcctggaccacctgggcctcctggtctcccaggggcc
cttcctgatggcggtggggaccttcagtgcccagctctgtgcccaccaggtcccccaggc
cccccaggaatgccaggcttcaagggacacactggtcacaaaggggagcctggtgaagta
ggaaaacaaggagagaagggtaaccctggccctcccggccctccagggattcctggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggtccaatgggtccagctggc
gacagaggtgacattggattcagaggcccacctggaatcccaggacccccagggaaagtt
ggagaccaagggagcaaaggacctcagggattccgggggcccaaaggtgacactggtaaa
cctggaccaaaaggaaacccaggggctcgtgggctcataggagaacctggaatgcctggc
aaggatgggcgggatggagctcctggactcgatggtgagaagggtgatgcagctcccatg
ggtgctcctggagagaaggggccaaatggacttcctggtctgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagccctggagagacaggagaggcaggtccctctgga
gagccaggcatccctggcgatgttggcattcctggtgagagaggcctgccaggacccaga
ggagcaactggaccactgggcctccaaggccccgtaggagcccgtggtgtccgaggtttc
caggggcccaaaggtgccagtggggagcccggccttcctggcccgactgggatccgtgga
gaaacaggagacaggggtcctcttggtgttcctggtcccaaggggaaccagggcattgct
ggagcagatggcctcccgggtgacaaaggagagctgggtccctttggaccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtccaaagggtgtgcaaggacctaatggg
acagctggagcaccagggatcccaggacatccaggacccatgggtcaccagggggagagg
ggtgtccctggcatcacaggaaaacctggacctcctggcaaagaggccagtgaacaacat
atcagagaactctgtggggaaatgataaatgagcaaattgcacagttggctgctaacctg
aggaagcccttggctcctggaatgccaggacggcctggcccagccgggcccccaggccct
cctggaaccacggggagtgttgggcatcctggtcctcgtgggccccctggatacagaggg
ccaacaggagagcttggtgatcctggacccagaggtgacactggtgaaaagggagacaaa
ggacctgttggccaaggtatcgatgggcctgatggtgaccaaggactgcagggactacct
ggtgtgcctgggattactaaaaacggccgtgatggtgctcagggtgaacccgggctgcca
ggggatcctgggactcctgggactactggggctcagggaactccaggaatatgtgacacg
tcggcttgcatgggagctgttgcagcatcaacttccaaaaaatcataa

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