Lonchura striata domestica (Bengalese finch): 110483613
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Entry
110483613 CDS
T05897
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110483613 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110483613 (NELFCD)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
110483613 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
110483613
NCBI-ProteinID:
XP_021409287
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Position
20:complement(5854276..5862768)
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AA seq
583 aa
AA seq
DB search
MEDADYFEGSAAEWGSEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPMQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
EMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHSLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIMMN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgattacttcgagggcagcgcggccgagtggggcagcgaggcggacggg
ggcgcgcaagatgatgaggatggggagggagaagatgatgccgaagtgcagcaggagtgc
ctgaagaaattttcaacacctgattatataatggaaccgtctatctttaacacgttaaag
agatatttccaagcaggagggtctccagagaatgtaattcagcttctctctgaaaactac
actgcagtggcacagactgtcaatttgctggcagagtggctcattcagacaggtgttgag
ccaatgcaagttcaggagactgtggagaaccacttgaagagcttactgatcaagcacttt
gaccctcggaaagcagattccatctttacagaggaaggagagactccagcctggcttgag
caaatgatagcacataccacgtggagagatcttttttacaaattggcagaagcccatcct
gattgtttaatgcttaattttactgtgaagcttatatctgatgctgggtatcaaggggaa
ataaccagtgtttcaacagcatgtcagcaactagaagtattttccagagtcctgcgtaca
tctctggcaacaattttagatgggggagaggaaaaccttgagaaaaacctccctgagttt
gctaagatggtgtgccatggagaacacacttacctctttgctcagtccatgatgtccatc
ctggcccaggaggagcagggcggctccgccgtccgacgcatcgcgcaggaggttcagcgc
tacgcccacgagaaaggccatgatgccagtcagatcaccttagcactgggcactgcagcc
tcctacccccgagcctgccaggctctgggggcaatgctgtccaaaggagctctgaatcca
gcagatatcactgtgctcttcaaaatgtttacaagtatggacccacctccggtagaactg
attcgagtgcctgcatttttggacctcttcatgcagtccttgtttaaaccaggtgctaag
atcaaccaggatcacaagcataaatatatccacatactagcatatgcagctagtgttgta
gagatgtggaaaaagaacaagagagtcagcatcaacaaggatgaactcaagtcgacctca
aaagccattgagactgttcacaatctgtgttgcaatgagaacaaaggggcatcagagctg
gttgcagaactgagcactctctatcagtgcatcaggttcccagtggtggctatgggtgtg
ttgaagtgggtggactggacagtgtcagagccacggtacttccagctgcagacagatcac
accccagttcacctggcactgctggatgagatcagtacctgccatcagctgcttcatccc
caagttctgcaacttcttgtcaagctctttgaaacagaacattctcagctggatgtgatg
gagcagctggagctgaagaagactctgctggacaggatggttcactcgctgagccgaggg
tacgtcctgcctgtcgtcagctacatccgcaaatgcctggagaagctggacacggacatc
tcactcatcagatactttgtgacagaggtgctcgatgtgattgctcctccgtatacctca
gactttgtacagctttttcttccaatcttggagaatgaaagtattgcaggcactataaaa
acagaaggtgaacatgatcctgtcacggagttcatagctcattgcaaatctaactttatt
atgatgaactaa
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