Lonchura striata (white-rumped munia): 110483617
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Entry
110483617 CDS
T05897
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110483617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110483617
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110483617
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110483617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
NUDE_C
Motif
Other DBs
NCBI-GeneID:
110483617
NCBI-ProteinID:
XP_031363639
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETALVATSPPSHSQMEDEIFNQSSSTPTSTTSSSPI
PPSPAANAVSDPQNIQKLSKNYPEISQNIPKIPQKHPPPPAPRSRPARLQMLCYSSVVAD
NSADPGLGGGGAQPPLGQPPGHGTPGAATKDPVAGAAGGGGGAALLGPAPSPAPCPSPPF
EPKGGPAPAPPLPNGPAPFGPDGKCPLGPLPLPKEQLYQQALQEPAWHHMPHPSDSERIR
KSTPKELFGGSSEPFLHFLLQNPQNLTQNPQNSTQKLGVTKIPKIARKSQKKRGKNAPKS
TQKELFEASPKFPKFFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTIT
DEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaagctgcagggggagattgacaggtgcctgaagaaggtctcggag
ggggtggagcagttcgaggacatctggcagaagctgcacaacgccgccaacgccaaccag
aaggagaaatacgaggccgacctgaaaaaggaaatcaaaaaactgcagcggctgcgggac
cagatcaagacatgggtggcctccaacgagatcaaggacaagcggcagctgatcgacaac
cgcaaactcatcgagacggctctggtggccacgtccccccccagccactcccagatggag
gacgagatcttcaaccagagcagcagcaccccgacctccaccacgtccagctccccgatc
ccgcccagcccggctgccaacgctgtgagtgacccccaaaatatccaaaaattatccaaa
aattatccagaaatatcccaaaatatcccaaaaataccccagaaacatcccccgcctcca
gctccccgatcccgcccagcccggctgcaaatgctgtgttacagctccgtggtcgccgac
aattccgcggatccggggctgggggggggcggcgcccagccccccctggggcagcccccg
gggcacgggacccccggcgccgccacgaaggacccggttgcgggcgcggcgggcgggggg
ggaggggcggcgctgctcggccccgcccccagccccgccccctgcccctccccccccttc
gagcccaagggcggccccgcccccgccccgcccctccccaacggccccgcccccttcggg
cccgacggcaagtgtcccctgggccccctgcccctgcccaaggagcagctctaccagcag
gcgctgcaggagcccgcctggcaccacatgccgcacccctcggattccgagaggatcaga
aaatccaccccaaaggagctttttgggggttcttcagagccttttcttcattttctgctc
caaaatccccaaaatttgacccaaaatccccagaattcaacccaaaaattgggggtgaca
aaaatccccaaaattgcccgaaaatcccaaaaaaaacggggaaaaaatgccccaaaatcc
acccaaaaggagctttttgaggcttctccgaaattcccgaaattcttcttcatcttctac
tacctggagggcacgaaggcgcagtacctggcggccaaggccctcaagaagcaatcctgg
cgcttccacaccaagtacatgatgtggttccagcggcacgaggagcccaaaaccatcacg
gacgagttcgagcagggcacttacatctacttcgactacgagaagtgggggcagcgcaag
aaggaaggcttcaccttcgagtatcgttacctggaggaccgagacctgcagtga
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