Lonchura striata (white-rumped munia): 110483626
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Entry
110483626 CDS
T05897
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110483626 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110483626 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110483626 (FARSB)
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
110483626 (FARSB)
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
110483626 (FARSB)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110483626 (FARSB)
Prokaryotic type
110483626 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
110483626
NCBI-ProteinID:
XP_021409304
UniProt:
A0A218UZA4
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All DBs
Position
9:17574127..17610169
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AA seq
589 aa
AA seq
DB search
MPTVSVKRELLFQALGRSYTDEEFDELCFEFGLELDEITSEKDIISKEKGEEKAKGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERINLPRFEKIIPAEGEGQRLIITEQTAQIRP
HAVAAVLRNITFTKDRYDSFIDLQEKLHQNICRKRALVAIGTHDLDTITGPFTYTAKAPS
EIKFKPLSQSQEYTASQIMDLYRTDSHLRHYLHLIENKPRYPVIYDSNGVVLSMPPIING
DHTKITLNTRNVFIECTGTDITKAKIVLDIIVTMFSEYCEKPFTVEAVEVVYPNGKTHIY
PELAYRTEKVKPEYINKKVGISETPSSLAKLLTRMCLKSHVTGNGNHIEIEIPPTRADII
HACDIVEDAAIAYGYNNIQMVIPKTYTIANQLPLNKFTELLRVDLAAAGFTEALTFALCS
QEDIADKLRTDISATKAVRIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVVKDPNTDVGARNYRHLCAIYYNKSPGFEIIHGLLDRVMQVLEVPPNEENGYTIKAAEG
TAFFPGRCAEVFAKGQSIGKLGVVHPDVITKFELTMPCSVLEINIEPFV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcagcgtgaagcgggagctgctgttccaggcgctgggcaggagctacacg
gatgaagaatttgatgagctttgctttgagtttggtttggagcttgatgaaattacatct
gagaaggatattataagtaaagaaaagggtgaagaaaaggccaagggcgcatctgatgtg
gttctctataaaattgatgttcctgccaaccgctatgatctgctttgcctggaagggttg
gtccgaggactgcaggtctttaaggaaaggataaatctccctaggtttgagaagataata
ccagctgagggtgaaggtcagaggctgattatcactgaacagactgcccagatccggcct
cacgctgtagctgccgtcctccggaatataacttttaccaaggaccggtatgacagtttc
atcgacctccaagagaaactgcaccaaaatatttgcaggaaaagagcattagtagcaata
ggtacccatgacttggacaccatcactggtccatttacttatacagccaaagcaccttct
gaaattaaatttaagcccttgagtcagtcccaggagtacacggcctcacaaattatggat
ctgtataggactgacagccaccttcggcactatttgcacctgattgaaaacaagccacgt
tatcctgtcatttatgacagcaatggggttgttctgtccatgccaccaatcatcaatgga
gatcatacaaaaataacgctaaataccagaaatgtgtttattgaatgtacaggcacagat
attacaaaggcaaaaattgttcttgatattatagtcacaatgttcagtgaatattgtgag
aagccattcactgttgaagcagtagaagtggtttatcccaatgggaagacccacatctat
ccggagctggcctatcgaacagagaaggtgaaacctgaatacattaacaagaaagtagga
atcagtgaaactccatcaagcctggcaaagctgctgactaggatgtgtttgaagtcacac
gtcacagggaatgggaaccatatagagattgaaatccctcctaccagagcagacattatc
catgcctgtgatatcgtagaagatgcagcaatagcttatggttataacaacattcagatg
gtgattccgaaaacgtacaccatagctaatcaactccccctcaataagttcacagaactt
ctgagagtggacttggcagctgctggattcactgaagcactcacttttgccctgtgttct
caagaagatattgcagataaacttcgcacggacatctctgcaacaaaggccgtgcgcata
gcaaaccccaagacagcagaatttcaggtggcacgtacaaccctccttcctgggctgctg
aaaactattgctgccaacagaaagatgcccttgcctctcaaactctttgagatttctgat
gttgtagtaaaagatcctaatacagatgtaggggcaagaaactacagacatttatgtgct
atttattacaacaaaagcccaggctttgagatcatccatggtttactggacagagtcatg
caggtcctggaagtaccaccaaatgaagagaatggctacaccatcaaggcagctgaaggc
acggctttctttcctggtcgctgtgctgaggtctttgccaaaggtcaaagcattgggaaa
cttggagtcgtacaccctgatgttatcaccaagtttgagctcaccatgccttgctctgtc
ctggagatcaacattgagcccttcgtgtga
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