Lonchura striata (white-rumped munia): 110483725
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Entry
110483725 CDS
T05897
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110483725 (RIMS1)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
110483725 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
110483725 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
110483725
NCBI-ProteinID:
XP_021409513
LinkDB
All DBs
Position
3:complement(83326092..83628127)
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AA seq
1572 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVYRNTVPPHCGSHSAVPVRVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPS
QDGTLSDTATGASSDTPREKKARLQERSRSQTPLSTAAASSQEISSSSVQPDRRKGAEVS
QPAMGPDQKQASRSRSEPPKERKKAVLVSDQNGKGVKSERKRVPKSSLQKEGPTDDRERK
ERHEGRRLEKGKSQDYPDLPEKLEEGKVPDDEKQRKEDEYHTRYRSDPNLARYPVKPHPE
EQQMRMHAKVSKARHERRHSDVALPHTEMEEAEVPENKLGKRSQLQGTQDRKSLVETQRS
YSIDRTGDVRISVSKQLTNHSPPTPRHSPVPIEHVEYKNHDSFIKQSRLDPSSAILMRKA
KREKMETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCE
DVEIESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTT
MPKESGALLGLKVVGGKMTELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA
TNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPETSHPPLESSSSSFESQKMERPSISVI
SPTSPGALRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFL
PDRSDKSKRRTKTVKKSLEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLG
EILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPISD
SDISDFDVDDGIGVVPPVGYRPSTRESKSTTLTVPEQQRATTHHRSRSVSPHRGDDQGRP
RSRLPNVPLQRSLDEIHQMRRSRSPTRHHDASRTPVDYRSREMDSQYLSDQESELLMLPR
AKRGRSAECLHTISELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPR
IHIQHASPEDDRQSRKVERYSSQKQARKGPAAETERTHQQGSPTQSPPADTSFSSRRGRQ
LPQVPVRSGSIEQEQENFNSPTKASLVVEERTRQMKMKVHRYNQTSGSGSSQEHEREQYT
KYNIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISTFT
PKMQGRRMGTSGRITKSTSVSGEMYKLEHIDGSQSDTAVGMVGTGGKKRRSSFSAKVVAI
VSRRSRSTSQLSQTEAGSKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSE
GNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRA
RGLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQTLVFEESPQGKVLQ
VIVWGDYGRMDHKCFMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSS
LESSTGPPCIRS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgcctcccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacatcatcatggcagtgatg
gaccggcagaaagaggaggaagaaaaagaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttatgctcttattgccggaccaagttctgtgctcgatgtggaggccgtgtc
tctctgcgatcaaacaatgaggacaaagtgtacaggaatactgttcctcctcattgtgga
tcacattcagcagtacctgtaagagttatgtgggtatgcaatttatgtcgaaagcaacaa
gaaatcctaacgaaatctggagcgtggttttttggaagtggaccacagccgtcacccagt
caggatggaacgctgagcgatacggcgacgggcgcaagctcggatacaccgagagaaaag
aaagcaagacttcaagagcgatcgaggtcacagactcccttaagtacagcagctgcctca
tcacaggaaatctcttcttccagtgtgcagcctgaccgtaggaaaggagcagaagtgtca
cagccagctatgggcccggaccaaaagcaagcttcaaggtctagaagtgaacctcctaaa
gagaggaagaaggcagtattggtttctgaccagaatggcaaaggtgtaaagagtgagcgt
aagcgtgtgccaaaatcctcacttcaaaaagaaggaccaacagatgacagggagcgtaaa
gagcggcatgaaggtagaaggctggagaaaggcaagtcacaggattacccagacttgcca
gagaaacttgaggaaggcaaagtgcctgatgatgaaaagcaaaggaaggaagatgaatat
catacccgttacaggagtgaccccaatctggcaagataccctgtaaaaccacaccctgag
gagcagcagatgcgcatgcatgccaaagtttctaaagcacgacacgagagaagacacagt
gatgtagctctgccacacacagaaatggaggaagcggaggtacctgagaataaattagga
aaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcagaggtcg
tactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaactaatcat
agcccaccaactcccaggcatagtccagttcctatagaacacgtagaatacaagaaccac
gattcctttataaaacagagccgccttgatcctagctctgctattctcatgcgaaaagca
aagcgggagaaaatggagaccatgctaaggaatgattcccttagctctgaccagtcggaa
tcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaaaggcag
atgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagctgtgaa
gatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattattactggctg
gatcctgccacgtggcacagcagagagacgtcccctattagttcgcatcccgtaacgtgg
caaccttccaaagagggagatcgcttaattgggcgtgttattcttaacaagagaacaacc
atgcctaaagaatcaggtgcattactggggctaaaagttgttggaggaaaaatgacagaa
ttaggacgacttggtgccttcattaccaaagtgaagaaaggtagcttggctgatgtggtg
gggcatctcagagcaggggatgaagttctagaatggaatggtaaacccttgcctggagct
acaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaaatc
attgtttcaaggcctattggtgatattccacggattcctgagacttcccaccccccatta
gagtctagttcaagttcttttgaatctcagaagatggaaaggccttctatttctgttata
tctccaactagccctggagccctacgggatgcacctcaggtcctaccagggcagctttct
gttaaactctggtatgacaaagtgggacatcaattaatagtgaatgttctacaggcaaca
gatttgccaccaagagtagatggacgccccagaaatccctatgtaaaaatgtattttctt
ccagaccgaagtgataaaagtaaaagaaggaccaaaacggtaaagaaaagtctagagcca
aaatggaatcaaacttttctctactcacatgtacatcgtagagattttagagaacgaatg
cttgaaatcacagtatgggatcagccaagagtacaagaagaagagagtgaatttcttgga
gagattcttatagagctggagacagcacttttagatgatgaaccacattggtataagcta
cagacacatgatgaatcttcactacctctgcctcagccatcaccattcatgccaagaaga
catgttcatggtggagagagcactagcaaaaaattacaaagatctcggccaatcagtgat
agtgacatctcagattttgatgttgatgatggtattggagttgttcctccagtaggttat
aggcctagcactagagaaagtaaatccacaacgctaactgtgccagaacagcaaagagca
acaacacatcatcgttcacgttctgtgtctcctcaccgtggtgacgatcagggcaggccc
cgttcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatcagatgaga
agatcacgttctccaactagacaccatgatgcctccagaactccagttgattacagatcc
agagagatggatagtcagtatttgtctgatcaagaaagtgagcttcttatgctgcccaga
gcaaagcgaggaagaagtgcagagtgcctacataccatcagtgaactgcagccctccctt
gacagggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcacca
gaacgagaaaggggtagatggtccccctccctagagaggagacgacctactagtcccagg
attcatatccagcatgcatctccggaggatgacaggcagtccagaaaagtggaaagatat
agcagccaaaaacaagctaggaaaggccctgcagctgaaacagaaagaacacatcagcaa
ggaagtcccacacagtctcctcctgcagacacctccttcagcagtcgtaggggaagacag
ctaccacaagttccagtaagaagtggcagtatagagcaagagcaagagaattttaactct
cccacaaaagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaagtgcac
cgttataatcagacatcagggtctggttctagccaagaacatgagcgtgagcaatatacc
aagtataatatacaaacagatcagtacagaagttgtgataacgtctctgccaaatcatca
gatagtgatgtcagtgatgtgtcagccatttcccgaaccagcagtgcctctcgcctcagc
agcacaagttttatgtcagagcaatctgagcgccctcggggcaggatcagtacatttact
cctaaaatgcaaggcagacggatggggacttcagggagaatcactaagagcacaagtgtg
agcggagagatgtataagctggagcacattgacgggagccagtcggacacggctgtcggc
atggttggaacaggtgggaagaaaaggcgttccagctttagtgccaaagtggttgccata
gtgtctcgaaggagcagaagcacatctcagcttagtcaaacagaggctggcagcaagaag
ctaaagagcacgatacagagaagcacagaaacaggaatggcagcagagatgagaagtcgc
atggttcgacaaccaagtcgagaatccactgatggcagcataaatagttatagctccgag
ggcaacttaatatttcctggggtacggctgggcgctgacagtcagttcagtgatttcctc
gatggactgggacctgcacagttagtaggacgacaaacactagcaacccctgccatgggt
gatatccagattggaatggtggataaaaaaggccagttagaagtagaagtcattagagcc
cgtggcctcacacaaaaacctggctccaaatctaccccagctccgtatgttaaagtgtat
ttactggaaaatggagcatgtatagctaagaagaagacaagaattgcaaggaagacgctt
gatcctctgtaccaacagacactggtttttgaagaaagtccacagggtaaagtccttcag
gtaatagtctggggagactatggccgaatggaccacaaatgcttcatgggagttgcccag
atccttctggaggaactggatttgtccagcgtggtaataggctggtataaattatttcca
ccttcatcgctagtggatccaacattgactccgctgacacgtagggcttcccagtcatct
ctggaaagttcaactgggcctccctgcattagatcatag
DBGET
integrated database retrieval system
