Lonchura striata domestica (Bengalese finch): 110483837
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Entry
110483837 CDS
T05897
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
lsr04510
Focal adhesion
lsr04540
Gap junction
lsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110483837 (PDGFB)
04020 Calcium signaling pathway
110483837 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110483837 (PDGFB)
04540 Gap junction
110483837 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110483837 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lsr04052
]
110483837 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
lsr00536
]
110483837 (PDGFB)
Cytokines and neuropeptides [BR:
lsr04052
]
Cytokines
Growth factors (RTK binding)
110483837 (PDGFB)
Glycosaminoglycan binding proteins [BR:
lsr00536
]
Heparan sulfate / Heparin
Growth factors/receptors
110483837 (PDGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
110483837
NCBI-ProteinID:
XP_021409693
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Position
1A:complement(65835915..65856259)
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AA seq
273 aa
AA seq
DB search
MPEAGRPRGCVREALPSRGSPSMCPQPAGPGVGMNFGVVFAFMLSLPLARMEGDPIPEDI
YEILGGSSVRSISDLQRALQIDSVERDSSSLSLNASQPDENPVALSRERRSLDALAAAET
AVLAECKTREVVFEISRNMVDSTNANFVVWPPCVEVQRCSGCCNNRNVQCRPTQIRVRHV
QVNKIEFVQRKPKFTKVVVPLEDHVQCRCEVVFRPPPRNIRPGPREQRRLSPALTTAAVS
QRRRVRRPPAQKRKHKKYKHVNDKKVLKEILIA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggccgggcggccgcggggctgtgtgcgggaagcgcttccctcccggggctcg
ccgtccatgtgcccgcagccggcggggcctggagtcgggatgaatttcggcgtggtcttc
gcgttcatgctctcgctgcccctggcccgcatggagggggaccccatacctgaagacatt
tatgagattttgggtggcagctcagtgcgctccatcagtgacctccagcgtgccctgcag
atagactccgtagagcgggacagctcgagcctgagcctgaatgcatctcagcctgatgaa
aaccctgtggccctgtctcgagagcgacgaagcctagatgctctggcagcagcagagacg
gctgtcctggcggagtgcaagacacgggaggtggtctttgaaatctcccgcaacatggtg
gacagcaccaacgccaacttcgtggtgtggccgccctgcgtggaggtgcagcgctgctcc
ggctgttgcaacaaccgcaacgtgcagtgccgccccacgcagatccgtgtccggcacgtc
caggtgaacaagatcgaatttgtccagaggaagccaaaattcacaaaagtcgttgtgcct
ttggaggaccacgtgcagtgtcggtgtgaagtcgtgttccgaccaccccccaggaacatc
cgtccagggccacgtgaacagagacgcttgtccccagcgctcaccacagccgctgtctca
cagaggcggcgagtacgccggccgccggcgcagaagaggaaacataagaagtacaagcat
gtcaacgataagaaagtgctgaaagaaatcctcatagcatag
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