Lonchura striata (white-rumped munia): 110483839
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Entry
110483839 CDS
T05897
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110483839 (CACNA1I)
04020 Calcium signaling pathway
110483839 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110483839 (CACNA1I)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110483839 (CACNA1I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110483839
NCBI-ProteinID:
XP_021409696
LinkDB
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Position
1A:66042970..66208183
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AA seq
2193 aa
AA seq
DB search
MAEYVPQPPSTWPAGPQPPHTSAICPLEPVDLGISEQQTPPEQPPSSLELGEDEEVTSPP
DPDVPYPDLAPVVFFCLKQTTSPRSWCIKMVCNPWFECVSMMVILLNCVTLGMYQPCEDM
DCLSDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEY
SLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGI
IGVQLWAGLLRNRCFMEENFTVQGDIVLPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPP
LKERGHECCLDKDDYYYYNSVRQEFNVSGMCVNWNQYYNVCRTGNANPHKGAINFDNIGY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYVCHILRKAKRRTLGLYNSVQSWRH
GHVQEPGDAKPVSNRKSQRHYRLCQQHNSLGCPPQGLAQPIAVTATSDPTNCPRCHRAEH
EASRRLSVLDSAGSDQEDGGASEGEGEGSQEDQGASALEKEEELEEGRLKLCSDVWREVR
VKLRVIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNVVFTSMFALEMILK
LAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRR
QLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ANRSYSDEDQSSSNIEEFDQFQEVQEGSDPKLCAIPVTPNGHLDPSLPSSNPPMASGGVT
NSSRNSLQLDQIRVAVGSRKSSVMSLGRMTSDQRSLSSSRSSYYGAWNRSGAWGSRRSSW
NSLARGHSLKHKPPSAEHESLLSGETHKAADGEPDGTGRVFHHRRTLSLDNKGSCDLLEL
ASVPSGHRVTHRLGAPPGASEHQDCNGKMPSIVKEIFPKMNNHKERGEDDEEIDYSLCFR
IRKMMEVYKPDWCELREDWSIYLFSPQNRFRLLCQTIIAHKLFDHVVLAFIFLNCITIAL
ERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQAYLRSSWNILDGFLVF
VSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNI
VLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCMAANYKWVHHKYNFDNLGQA
LMSLFVLASKDGWVNIMYNGLDAVAVDQQPVINNNPWMLLYFISFLLIVSFFVLNMFVGV
VVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCHIRLLIHSVCTSHYL
DIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYLFTTVFVFEAVLKLVAFGLRRFFKD
RWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRALL
DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAFL
TLFQVSTGDNWNGIMKDTLRDCSHDDRSCLSNLQFISPLYFVSFVLTAQFVLINVVVAVL
MKHLDDSNKEAQEDAEMDAELEMEITHGLCSHKSGSPNSGQGKGAGTGGGGGRTEPEGHL
CMRCYSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFHHYSSPAMCEKCNHDKQEVQ
LAEMEALSLNSDKSSSILLGDESDNRNAAQLNPKEIKQDGQENPDSTGVDYLGECLLPAS
SEDGSTNPDSYLCEMENTPFDSVQSWLKHESNKVPPRPFSPGASSPLLPVPTEFFHPAIS
ATQTGPEEVSCPHNLPKISLQGSWASLRSPGVNCSLLHQSPESDTSLDSRSSSSAGSLQT
TLEENSLNLSDSPQCALDLPVALCPVPAAGSQRPLAAPLSPASRRRSLRGRGLFNLRSLC
RHQRSHSSGGSTSPGCTHHDSMDPSDEEGAGSSLRGGGNNSEPSETLSSLSLTSLFSPPP
PALTVVKKCSSTSSLHASPSPRRPAAHHAKPFYTVDPRGFLSMPSWVTDFCKDTPSPREG
EEPDGPGRLGTGDRSSPLPSKLELGDGVSKRNR
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacgtcccccagcctccctccacctggcctgcaggcccacagccccctcac
acttctgccatctgcccactggagcccgtggatctgggcatctcggagcaacaaacacca
ccagagcagccaccgtcctccctggagctgggtgaggatgaagaagtcacctcccctccg
gatcctgatgttccctacccagacttggcccccgttgtcttcttctgcttgaagcagacc
accagcccacggagctggtgcatcaaaatggtgtgcaacccctggttcgagtgtgtcagc
atgatggtgattctgctaaactgtgttaccctgggaatgtaccagccatgtgaggatatg
gactgcctttctgacaggtgtaaaatcttgcaggtgtttgatgatttcatcttcatcttc
tttgccatggaaatggtcttgaagatggtggccctggggatctttggcaagaagtgttac
cttggagacacctggaaccgcctggatttcttcattgtcatggctgggatggtggagtac
tccctggatctccaaaacattaacttgtctgcaatccgtactgtccgtgtcctgagaccc
ctgaaagcaatcaaccgtgtgcccagcatgcgcatccttgtgaacctgctgctggacacc
ttgcccatgctggggaacgtccttcttctctgcttctttgtcttctttatcttcggcatc
attggggtgcagctgtgggctgggctgctccgcaaccgctgcttcatggaggagaacttc
acagtacaaggtgacattgtcctgcccccttattaccaaccagaggaagatgatgagatg
ccctttatctgctcgttgtcaggagacaatggaattatgggctgtcacgagatacccccg
ctgaaggagcgaggccatgagtgttgtttggacaaggatgattattattattacaattca
gtccggcaagagtttaatgtcagtggtatgtgtgtgaactggaaccagtactacaatgtg
tgccgcacaggcaacgccaacccgcacaagggtgccatcaacttcgacaatatcgggtat
gcctggattgtgatatttcaggtgatcacactggaagggtgggtggagatcatgtactat
gtgatggacgcccattccttctacaattttatctactttatcttgttgataatcgtgggc
tccttcttcatgatcaacctatgcctggtggtgatcgccacgcagttctcggagaccaag
cagcgggagcaccagctgatgcaggagcagagggcccggtacctctcctccagcacggtt
gccagctacatggagccgggagactgctacgaggagatcttccagtacgtctgccacatc
ctgcgcaaggccaagcgccgcaccctggggctgtacaacagcgtgcagagctggcgccac
ggccacgtgcaggagcccggcgatgccaaacccgtcagcaacaggaaaagccagaggcac
tacaggctttgccagcagcacaactctcttggctgccctcctcagggtttagcccagccc
atcgctgtgacagcaacctctgatcccaccaactgcccccgatgccatagggcagagcac
gaagcctccagaaggctctcagtcctggacagcgctggctcagaccaggaggatggagga
gccagtgagggggagggagagggcagccaagaagaccagggtgcctcggcgctggagaag
gaggaggagctggaagaaggacggctgaagctctgcagtgacgtgtggcgagaagtgagg
gtcaagcttcgagtgattgtggacagcaagtatttcaaccgtgggatcatgattgcaatc
ctagtgaacaccatcagcatgggcattgagcaccacgaacagccagaggaattgaccaac
atcttggagatcagcaatgttgtctttacaagcatgtttgccctggagatgatcctgaaa
cttgctgcttttggcctctttgattatcttcgcaacccctacaacatctttgacagtatc
atcgtcatcatcagcatctgggagatcattggccaggcagacgggggcctgtctgtgctg
aggacattccgactccttcgcgtgctgaagctggtgcgtttcatgccggcgctgcgccgc
cagcttgtggtgctgatgaagactatggacaacgtagccaccttctgcatgctgctcatg
ctcttcatcttcatattcagcatcctgggaatgcacatctttggttgcaagttcagcctc
aggacagatacaggagatacagttcctgacaggaagaattttgactccctgctgtgggcc
atcgtcaccgtcttccagattctaacccaggaggactggaatgttgtactctacaatggc
atggcctctacctcgccgtgggcttccctctactttgtggctctcatgacatttggcaat
tatgtactcttcaatcttctggtggccattcttgtggagggattccaggctgagggtgat
gccaaccggtcatactcagatgaagatcagagttcttcaaacatagaggagtttgatcaa
ttccaagaggtccaggaaggctcagatcccaagctctgtgcaattcctgtgacaccaaat
gggcacctggacccatccttgccctcttccaatccaccaatggcttctggtggggtcacc
aactcttcacgcaactcactgcaacttgaccagatccgcgttgctgttggctcccggaag
agcagtgtgatgtccctggggagaatgacgtctgaccagcggtccttgtccagctcccgc
agttcctactacggtgcctggaaccgcagcggagcctggggaagccgtcgctccagctgg
aacagcctggcccggggacacagcctgaaacacaaacctccctcagctgagcacgagtcc
ctcctgtcaggggaaacacacaaggcagcagatggggagccggatgggacaggaagggtg
tttcatcaccgccggacactctctctggataacaaaggctcctgtgacctgctggagttg
gcctcggtcccttctggccacagagtgacccataggctgggagcaccgcctggggccagt
gagcatcaggactgcaatggcaaaatgcccagtattgtcaaggagatcttcccaaagatg
aacaaccacaaagaacggggagaggatgatgaagaaatagattacagcctgtgctttcgc
atccggaagatgatggaagtctataagccagactggtgtgagttacgggaagactggtcc
atatatctcttctctccacagaacaggtttcgcctcctctgccaaacaatcattgctcac
aagctctttgaccacgtagtgctggccttcatcttcctgaactgcatcaccattgccctg
gaaaggccccagattgaacacagaagcacggaaagaatctttctcactgtgtccaactac
attttcacagcaatctttgtagctgagatgacactgaaggtggtctctctaggcctgtat
tttggggaccaggcttatctccgcagcagttggaacatcttggatggcttcttggtcttc
gtgtctctcattgacattgtggtctcagtggcctctgctggcggtgccaaaatcctgggg
gtgctgcgagtgctccggttgctgcgcaccctacgtcccctccgagtcatcagtcgagcc
cctggtctgaagctggtggtggagacactcatttcttccctcaaacccataggaaacatt
gtcctcatctgctgtgctttcttcattatctttggcatcctgggtgtgcagcttttcaag
ggcaagttctaccactgcctgggggtcgacatcaggaacatcaccaaccggtctgactgc
atggcagcaaactacaagtgggtgcaccacaagtataacttcgacaatctgggacaggct
ctgatgtccctctttgttctggcttccaaggatggctgggtgaatattatgtataatgga
cttgatgctgtggctgttgaccagcagccagtgatcaacaacaacccctggatgctactc
tacttcatctcctttctcctcatcgtcagcttctttgtgctcaacatgttcgtgggggtg
gtagtggagaatttccacaagtgccggcagcaccaggaggctgaggaggcgcgccggcgg
gaggagaagcgcctgcgacgcttggagaagaagcgaaggaaggcgcagcgtttgccgtac
tatgctacctactgccacatacgcctccttattcattcggtctgcaccagccactatctg
gacatcttcatcactttcatcatctgcctcaacgtggtcactatgtccttggagcactac
aaccaacctgtgtccctggaaaccgccctcaaatactgcaactacctgttcaccactgtc
ttcgtgtttgaggcagtcctcaagctggtggcatttggtctgcgacgattcttcaaagac
aggtggaaccagctagatctggccattgtgctgctgtctgtcatgggcatcacattggaa
gagattgaaatcaacgctgctctcccaattaaccccactatcatccggatcatgagggtg
ctgcgtattgcccgggtcctgaagttactgaagatggccacaggaatgcgagcgctgctg
gatacagttgttcaagccctgccacaggtgggaaaccttggactccttttcatgctcctg
tttttcatctacgctgctttgggggtggagctctttggaaaattggtgtgcaatgatgag
aacccctgtgagggcatgagccgccacgccaccttcgagaactttgggatggccttcctt
acacttttccaggtgtccacgggtgataactggaatggaataatgaaggacaccttgcgt
gactgcagccacgatgaccggagctgtctcagcaacctgcagttcatctccccactgtac
tttgtcagctttgtgctcacagcccagtttgtcctcatcaatgtggtggtagctgtgctc
atgaaacatctcgacgacagcaacaaggaggcccaggaggatgcagagatggatgctgag
cttgagatggaaattacacacgggctgtgctcccacaagtcaggctctccaaattcagga
cagggaaaaggagcaggaacaggaggaggtggtggtagaactgaacctgaaggacatctg
tgcatgagatgttactctccagcccaggagaacttatggctggacagtgtctctttaatt
attaaggactccttcgacggggagttaatgatcatcgataacctatcgggctccgtcttc
catcattactcctcgccggccatgtgcgagaagtgtaaccatgacaagcaagaggtccag
ctggctgaaatggaagctttatccctcaactcagacaagtcctcttccatccttctagga
gatgagtcagacaatcgaaatgctgctcagctgaatcctaaggagatcaagcaggatggc
caggagaaccctgactccactggggtagactatctgggggaatgcctgcttccagcatcc
agtgaggatggctctacaaacccagatagttacctgtgtgaaatggagaatacacctttt
gactcagttcagtcttggttaaagcatgaaagtaacaaagtccctcccagacccttctct
ccaggtgcatcttcccctctgttacctgtaccaacagaatttttccacccagccatctct
gccacccaaacaggccctgaggaagtctcatgtccacacaaccttcctaagatttctctg
caaggctcatgggcatcactgagatctccaggtgtgaactgctcacttctccatcagtcc
cccgagagcgacacgtcgctggacagccggagcagcagctcggccggcagcctgcagacc
acgctggaggagaacagcctcaacctcagcgactctccgcagtgcgccctggacctgccg
gtggctctgtgccccgtgccggcggcgggcagccagagacccctggcagccccgctgtcc
cccgcctcccgccgccggagcctgcggggccgggggctcttcaacctgcggagcctgtgc
cgccaccagcgcagccacagcagcggcggcagcaccagccccggctgcacccaccacgac
tccatggacccttcggatgaggagggggcgggcagcagcctgcgcgggggtggcaacaac
agcgagccctcggagacgctcagcagcctctcgctgacctcgctcttctcgccgcccccg
ccggcgctgaccgtggtgaagaagtgcagcagcaccagcagcctccacgccagcccctcg
ccccgccgccccgccgctcaccacgccaagcccttctacaccgttgaccctcggggcttc
ctctcgatgccctcctgggtgacggacttctgcaaggacaccccctcgcccagggaagga
gaggagccggatggccccggcagactggggacaggggaccgcagctccccgctcccttcc
aagctggagctgggagatggagtcagcaagaggaacagatga
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integrated database retrieval system
