Lonchura striata (white-rumped munia): 110483916
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Entry
110483916 CDS
T05897
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110483916 (HCN4)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
110483916 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
110483916
NCBI-ProteinID:
XP_021409842
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All DBs
Position
10:2633956..2731317
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AA seq
1210 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQIGPKASIMDEEDDSDKDTRRKSIRLKPLPSPSAGSTRALGGD
PGRGGDPGLLETEAGGKGAKTSTNGDCRRFKGSLSSLTSRHLHDAAEEKRLIGGEGEPAS
PGEDKSPPGSGELEQGLPVPPAPASPPEPQQPPPRACSSTSIKVEGGGGCDQITPDEEQR
LGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDL
TMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEII
LDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPD
DCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEE
SILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLKFEVFQPGDYIIREGT
IGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQ
HDREMAHCAHNVQAAAAAASTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFR
PPVSVLGSLGQQPSQTPRQLKRFQSLIPSAGPSAVGSLSSTPSQLHTPGAETPSSSSFHI
QQLAGFSAAAGLGQFQVGSPPGGSGQPGPSSTSSVGLSQFQSAPSGSPLGAAQPLQQQQQ
QQQQQQQQQQQPALSSSGFGHFQQASASSPSTSLTQLSSNSPPSLLNQFQPTTRPLQGGQ
SQQLSGSGTLGGLNHFQAPPSSNSPSSSLSQLAQASGGPSAGLCQTHPSALGSLTGTIAQ
LHQERPPFASASPLQQPGIASPSYTPSGLSPPSQSPVAARTFQSGPGGASGSQGSLLLPQ
PASPPAQPLPARGAVPPGRLNQDIKLISASQPSLPQELAQTLGRHSSPHSSRESVSSFSP
FPGGGSGLLGRPCSSIPGRVTLPRQMSSGSLPHPLALGAGAAPLTAGGRKESIVLTGDLE
PVRSKLPSNL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccctccatgcgcaagagactctacagcctgccccagcagatcgga
cccaaggcgtcgatcatggacgaggaggatgacagcgacaaggacacccgcaggaaaagc
atcaggctcaagccactgccttcgccctctgctgggagcacccgggccctcgggggggac
cccggccgagggggggaccccggcctgctggagacggaggccggcggcaagggcgccaag
accagcactaacggggactgccgccgcttcaaagggagcctgtcctcgctcaccagcagg
cacctccacgacgcggccgaggagaagcggctcatcggcggcgagggggagccggcctct
cccggggaggacaagagtccccccggcagtggggagctggagcaggggctgcctgtgccc
ccagcgcccgcctcccccccggagccccagcagccgcccccccgggcctgctcctcgacc
tccatcaaagtggagggaggtggagggtgcgaccagatcaccccagatgaggagcagagg
ctcggccaggccggtttcatgcagaggcagttcggggccatgctccagccgggggtcaac
aaattctccttgaggatgtttggcagccagaaggccgtggagagggagcaggaaagagtt
aagtctgccgggttctggatcatccatccctacagcgacttcaggttttactgggatctg
accatgctgctgctgatggtagggaacctgatcatcatccctgtgggcatcactttcttc
aaggatgaaaacaccaccccatggattgttttcaacgtggtttcggacacgttcttcctc
atcgacctcgtcctcaacttccggacaggcatcgtggtggaggacaacaccgagatcatc
ctggacccgcagaggatcaagatgaagtacctgaagagctggtttgtggtggattttatc
tcctccatccccgtggactacatcttcctgatcgtggagacgcgcatcgactccgaggtg
tacaagacggcgcgggccctgcgcatcgtgcgcttcaccaagatcctgagcctgctgcgc
ctgctgcgcctctcccgcctcatccgctacatccaccagtgggaggagatcttccacatg
acctacgacctggccagcgccgtggtgaggatcgtcaacctcatcgggatgatgctgctg
ctgtgccactgggatggctgcctgcagttcctggtgcccatgctgcaggacttccccgac
gactgctgggtgtccctcaaccgcatggtgaacgactcctggggcaagcagtactcgtac
gccctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaggcgccggtg
gggatgtcggacgtgtggctcaccatgctcagcatgatcgtgggggccacctgctacgcc
atgttcatcggccacgccaccgccctcatccagtccctggactcctcgcgccgccagtac
caggagaagtacaaacaggtggagcagtacatgtccttccacaagctgcccgccgacatg
cggcagcgcatccacgactactacgagcaccgctaccagggcaagatgttcgatgaggag
agcatcctgggcgagctgagcgagcccctgcgcgaggaaatcatcaacttcaactgccgc
aagctggtggcctccatgcccctgtttgccaacgcagaccccaactttgtgacgtccatg
ctgaccaagctgaagttcgaggtgttccagcccggggactacatcatccgggagggcacc
atcggcaagaagatgtacttcatccagcacggcgtggtcagcgtcctcaccaagggcaac
aaggagaccaagctggccgatggctcctactttggagagatctgcctgctgacgcgcggc
cggcgcacggccagcgtgcgcgccgacacctactgccgcctctactcgctgtccgtggac
aacttcaacgaggttctggaggagtaccccatgatgaggagagccttcgagaccgtggct
ctggacaggctggacaggattggcaagaagaactccatcctgctgcacaaagtgcagcac
gacctcaactcgggggtgttcaactaccaggagaacgagatcatccagcagatcgtgcag
cacgaccgggagatggctcactgtgcccacaacgtgcaggccgccgccgccgccgcctcc
acgcccacgccggtcatctggacgccgctgatccaggccccgctgcaggcggccgccgcc
accacctcggtggccatcgccctgacccaccacccgcgcctgcccacggccatcttccgc
ccgcccgtgtccgtgctgggctccctgggccagcagcccagccagaccccccggcagctg
aagagattccagtcgctcatcccgtccgccggcccctctgccgtgggctccctgtccagc
accccgtcccagctgcacacgccgggcgccgagacgccctcgtcctcctccttccacatc
cagcagctcgccggcttctcggccgccgccggcctgggccagttccaggtggggtctcct
ccggggggctccggccagccggggccgagcagcacctcctcggtggggctgagccagttc
cagagtgcaccctctgggtcacccttaggcgcagctcagcccctgcagcagcaacagcag
cagcagcagcagcagcagcagcagcagcagcagccagccctctccagcagcggatttggg
cacttccagcaagcctcagccagctccccatcgacatccctcacccagctctcatcaaac
tcccctcccagcctcctgaaccagttccagcccaccacgagaccactgcaggggggacag
tcgcagcagctctcgggcagtgggaccctggggggactgaaccacttccaagcccctcct
tcttccaactctccatcctccagcctcagccagctggcgcaggcctcgggcgggccgtcc
gcaggcctgtgccaaacacatccaagtgctttaggatctctgactggaacgatagcccag
ctccaccaagagcggcctcccttcgcctccgcgtccccgctccagcagcccggcatcgcc
tctccctcctacaccccttctggccttagtcctcccagtcagagcccggtggccgccaga
actttccagagcggccctggcggggcctcgggctcgcagggctcgctgctgctgccgcag
cccgccagccccccggcccagccgctgccggcgcgcggcgcggtgccgccggggcgcctc
aaccaggacatcaagctgatttctgcgtcccagccctctctgccccaggagctggctcag
acgctgggccgccacagctctcctcattcctccagagaatctgtttccagcttctcccct
ttccccggcggcgggagcggactgctggggaggccgtgtagctccatccccgggcgggtg
acgctgccacgccagatgtcctcaggttctctgccacacccgctggccttgggagccggc
gccgctcccctgactgcgggcgggcggaaagagtccatagtgctcacgggggatctggag
cccgtcaggtccaaactgccctccaatttgtga
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