Lonchura striata (white-rumped munia): 110483993
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Entry
110483993 CDS
T05897
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110483993 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110483993 (TAF6)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110483993 (TAF6)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110483993 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
110483993 (TAF6)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110483993 (TAF6)
STAGA complex
110483993 (TAF6)
TFTC complex
110483993 (TAF6)
SAGA complex
110483993 (TAF6)
SLIK complex
110483993 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
Motif
Other DBs
NCBI-GeneID:
110483993
NCBI-ProteinID:
XP_021409976
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
PLYGFHAQEFIPFRFASGGGRELYFYEEKEVELSDIINTPLPRVPLDVCLKAHWLSIEGV
QPAIPENPPPDRPQIGPYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFTLLIYLM
RMVKALMDNPTLYLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQVCKN
FSTTTNNIQSRITKTFTKSWVDDKTPWTTRYGSIAGLAELGHDVIKTLILPRLPAEGERV
RNILEGPVVSTIDRIGADHVQSLLLKHCAPVLAKARPPPDSPECYRGDFGYLGALLCSHV
VKARAQAALQAQQVNRTTLTITQSPPRCPQVITLSTSPAPTATSPVTTTVPSVQPLVKLV
SPGVPGATTAATTATAGVPGVPGVPGAVQKYIVVSLPPAAGDGKGGTATTATPPPAPAPQ
LSPSATAATAGGSPVAAARAEAGDSPQGATAVPSGKANGTPGVAAQEPPAGQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
cccctgtacgggttccacgcccaggagttcatcccgttccgcttcgccagcggcggcggg
cgcgagctctacttctacgaggagaaggaggtggagctgagcgacatcatcaacaccccc
ctgcccagggtgcccctggacgtctgcctcaaggctcactggctcagcatcgagggcgtg
cagccggccatccccgaaaaccccccgccagatcggccccaaattggcccctacaaggag
atcaccgaggcctgcgtgggctcctgcgaggccaaacgggctgaggcgctgcagagcatc
gccaccgacccggggctgtaccagatgctgccgcgcttcactctgctcatctacctgatg
cggatggtgaaggccctgatggacaaccccacgctgtacctggagaaatacctgcacgag
ctgatcccggcggtgatgacgtgcatcgtcagccgccagctctgcctgcgcccggacgtg
gacaaccactgggccctgcgggacttcgccgcgcgcctggtggcccaggtgtgcaagaac
ttcagcaccaccaccaacaacatccagtcccgcatcaccaaaaccttcaccaagagctgg
gtggatgacaagacgccctggaccacgcgctacggatccatcgcggggctggccgagctg
ggccacgacgtgatcaagaccctgatcctgccgcggctgccggccgagggcgagcgcgtg
cggaacattctggaagggccggtggtgagcaccatcgaccgcatcggcgccgaccacgtg
cagagcctgctgctgaagcactgtgcccccgtgctggccaaggcgcggccgccccccgac
agccccgagtgctaccgcggcgatttcggctacctgggcgcgctgctctgctcccacgtg
gtcaaagccagggcccaggcggccctgcaggcccagcaggtcaacaggaccacgctgacc
atcacccagtcacctccccgctgtccccaggtgatcacgctgagcacgtcgcccgccccc
acggccacctcccctgtcaccaccactgtccccagcgtgcagccactggtcaaactggtg
tcccccggtgtccccggtgccaccaccgccgccaccaccgccacggccggtgtccccggc
gtccccggcgtccccggcgcggtgcagaaatacatcgtggtgtccctgccgcccgccgcg
ggggacggcaagggtggcactgccaccaccgccacccccccgcccgcccccgccccgcag
ctgtccccaagtgccaccgccgccaccgccggcgggtccccggtggccgcggccagggcg
gaggctggggacagtccccaaggggccaccgctgtcccctcgggaaaggccaacgggacc
cccggggtggcggcgcaggagccgccggccgggcagtga
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