Lonchura striata (white-rumped munia): 110484155
Help
Entry
110484155 CDS
T05897
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110484155 (TAF1C)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110484155 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
110484155
NCBI-ProteinID:
XP_021410279
LinkDB
All DBs
Position
Z:34746673..34751032
Genome browser
AA seq
782 aa
AA seq
DB search
MTALLEDIDRLEARRGCPRQHLASRLRWFSHLCRDWLFEVPLGLLADCLHEELTQQWSNL
LFDDSLTGGALAWLPPEDGGTTRGCLVYPGGQAMNHLYFQDVVLEGLPHTRGSPVQFELS
GRIRQVAAARVDGQDFVGVRSDYHCGVWRVPGKTGAAPAPLQVIRTDVPASCLTVSPHLP
GELSVCTQSGTVYLWSVETGLQKLRHDSQTMFFRDHSPWRWSDFTAHPRVLSCADRTGLQ
CLDARAPKRCHFDLFKVGEEAGCQQGERVVLPMYLGRAHPSQYLVTTQFSVYVLDERLPL
VPVLKWPHMMKAPPLFAHLMPGKPERSHRVLLGASRTQELLLLQYRGGSQSACQLAGTPQ
KLHNIAGCLQHLPTQLPHRHHLLQQRLSAPAAGLAAMLQEDGPHKSMLIFQLSEAGDVFC
QRLTHKAAQAPASPSRDEATTAPGSSPLFEAPASSPHGLGSEGEEEEEQTFYLPNLEVII
DEEEEDMGTPAPLEEAELLQEPCASPQPSPAVPSPAAALRYRRWLRALFRAWREPARHTW
PPSLSQRRLFTRRDLQGPAGPSSLQRQMRQRLRQTMQEGGRIQCWEPLALQPPPLPQTRE
LAGVPDPLSTRLTAAWAGDWEQWWEERTSFSVAQRQQALREQRRRQKRARGRRSLSASFT
SSLTYQSELSELSDVGPSQLSQGHPPILSQEGSPPAGSPPVHRPPPSPAPDEALLSSQSF
RCRGIPKERRKTLRDYLSVWAEGPCEPPEPPGSQASQLCIPSSQSQLSSASQPRRKRPRM
GF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgttggaagacattgaccgcctggaggcccgacgcggctgcccccggcag
cacttggcctcccgcctgcgctggttctcccacctctgtcgtgactggctcttcgaggtg
ccgctgggactgctggcagactgcctgcacgaggagctgacgcagcagtggtccaacctg
ctctttgacgacagcctcactgggggggcactggcctggttgccccctgaagacgggggg
acaaccaggggctgcctggtgtaccctggagggcaggctatgaaccacctctatttccag
gatgtggtgctggaggggctgccccacacccgaggctccccagtgcagtttgagctcagc
gggcgcatccggcaagtggctgcagcccgtgtggatgggcaagattttgttggggttcgc
tcagactatcactgtggtgtttggagggtgccgggcaagacaggggcagctcctgcccca
ctacaagtgatccgcaccgatgtgcctgcctcctgcctcactgtcagccctcaccttccc
ggggagctgtctgtctgcacccagagcgggactgtctacctctggagcgtagagaccggg
ctgcagaagctccgccatgactcccagaccatgttttttcgggaccattcaccctggcgc
tggagtgacttcacagctcacccacgagtgctcagctgtgctgaccgcacaggcctgcag
tgcctggatgcccgggcccccaagagatgccacttcgacttgttcaaggtgggcgaggaa
gctggctgtcagcagggcgagcgtgtggtgctgcccatgtacctgggtagggctcacccc
tcacagtaccttgtcaccacccagttctccgtgtatgtgctggacgagcggttgccactg
gtgcctgttctgaagtggccacatatgatgaaggcccctccactctttgcacacctgatg
ccagggaagcccgagaggagccacagggtgctgctcggtgcgtcccgcacccaggagctg
ttgctgttgcaataccgtgggggcagccagtcggcctgtcagctggctgggactccgcag
aagctgcacaatattgcagggtgcctgcagcacctgcccacccagctcccacaccgccac
cacctgctccagcagcgcctgtcagctccagcagcagggctggctgccatgctgcaggag
gatggaccacacaagtccatgttgattttccagctctctgaggctggggatgtcttctgc
cagaggctgacccacaaggcggcacaggcccctgcatccccatcgagggatgaggccaca
acagcccctggctcttctcctctcttcgaggctccagccagcagcccacatggcttgggc
agtgagggagaagaggaggaagagcaaacattctacttgcccaacctggaggttattatc
gatgaggaggaggaggacatgggcacaccagcacccctggaggaagctgagctactgcag
gagccatgtgccagccctcagccctccccagcggtgcccagcccagctgcagccctgcga
taccgccgctggctgagggcccttttcagggcctggagggagcctgcccggcacacctgg
ccccccagcctcagccagaggcgactcttcacccgcagagacctgcaagggccagcaggc
cccagcagcctgcagagacagatgcgccagcggctgcgccagactatgcaggaagggggc
cgcattcagtgctgggagcctttggccctccagccccctcccctgccacagacccgggag
ctggcaggggttccagaccccctaagtacccgtctgacagcagcttgggctggggactgg
gagcagtggtgggaggagaggacaagtttcagtgtggcgcagagacagcaggcactgcgg
gagcagcggcggcggcagaagcgagcccggggccgccgcagcctttcggccagcttcacc
tcctccctcacttatcagtctgagctgtctgagctgagtgatgtgggcccctcacagctc
tcccagggccacccacccattctctcccaggagggctcaccaccagcaggcagcccccca
gttcacagacccccgccctcaccagcacccgacgaagccctgctgtcttcacagagcttt
cgctgccgcggcatccccaaggagcgtcggaaaacactgcgggactacttatccgtgtgg
gccgaggggccctgcgagcccccagagccccctggcagccaggccagccagctgtgcatc
ccttcttcacagagccagctgtcctccgcctcgcagccccgccgcaagcgcccacgaatg
ggcttctga
DBGET
integrated database retrieval system
