Lonchura striata (white-rumped munia): 110484157
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Entry
110484157 CDS
T05897
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110484157 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110484157 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110484157 (TARS1)
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
110484157 (TARS1)
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110484157 (TARS1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110484157 (TARS1)
Prokaryotic type
110484157 (TARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
110484157
NCBI-ProteinID:
XP_021410282
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All DBs
Position
Z:35809192..35823807
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AA seq
711 aa
AA seq
DB search
MAGADSQVVAGEEKKADCGKKKMKEGAGDGGRSELNPWPAFINERLEMYNKLKAEHDALL
AERAANDSKTIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRP
LEEDCSLELLKFEDEEAQAVYWHSSAHIMGEAMERIYGGCLCYGPPIENGFYYDMFLEEG
GVSSNDFSALETLCKKIMKEKQAFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVY
RCGPLIDLCRGPHVRHTGKIKTIKIHKNSSTYWEGKADMESLQRIYGISFPDTKLLKEWE
KFQEEAKSRDHRKIGRDQELFFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRGFQEV
VTPNVFNSKLWMTSGHWQHYSDNMFSFEVEKEIFALKPMNCPGHCLIFDHRPRSWRELPL
RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLGFLRTVYDVFGF
SFKLNLSTRPEKYLGDIEVWNKAEKQLENSLNAFGEKWELNPGDGAFYGPKIDIQIKDAI
GRYHQCATIQLDFQLPVRFNLTFVSHDGNDKTRPVIIHRAILGSVERMIAILTENYGGKW
PLWLSPQQVMVVPVGPACDEYAQKVRQHFHDAGFMADVDVDPGCTLNKKIRNAQIAQYNF
ILVVGEKEKASGTVNIRTRDNKVHGERTIADTVERLLQLKCSRSRQAEEEF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgctgacagccaggtggtcgctggggaagagaagaaagctgactgcgggaag
aagaagatgaaggaaggggctggcgatggagggcggtcggagctaaatccttggcctgca
tttatcaatgagcgtttggagatgtacaataaactaaaggctgaacatgacgcactcctt
gcagaaagagctgcaaatgacagtaaaaccattaaagttacgttacccgatggcaagcag
gttgatgctgaatcttggaagactactccttatcaaattgcatgtggaattagtcaggga
ttagctgataacacagttattgccaaagtgaacaaggtggtttgggatctagaccgtcct
ttggaggaggactgttccttggagctgctgaagtttgaagatgaagaggctcaagcagtc
tactggcactcaagtgctcacataatgggtgaagctatggagcgaatctatggtggctgt
ttgtgctatggcccaccaatagaaaatggattttattatgacatgtttcttgaggaaggg
ggtgtatcaagtaatgatttctctgctttggaaacattgtgcaaaaagataatgaaggaa
aaacaagcctttgaaagactggaagttaagaaggaaacacttcttgaaatgtttaagtat
aataaattcaagtgtcgcatcctgaatgagaaggtcaataccccaactactacggtatac
aggtgtggtcccctgatagatttatgcagaggccctcatgtcagacatactggcaagata
aagaccataaaaattcataagaattcttctacctattgggaaggcaaggccgatatggaa
tccctccagaggatctacggaatttcattcccagatacaaaactgctgaaggagtgggag
aaattccaggaggaggctaaaagcagagatcacagaaaaattgggcgggaccaagaactg
ttcttcttccatgaacttagccctggtagctgttttttcttaccaaaaggagcttacatt
tataacacgttaattgaatttatacggagtgagtatcgaaaacgtggattccaggaggtt
gtcactccaaatgttttcaacagcaaactgtggatgacttcggggcactggcagcattac
agtgataatatgttttcctttgaagtggagaaagaaatctttgctctgaagcctatgaac
tgtccaggacattgccttatttttgaccatcgcccgaggtcgtggcgtgagctgccattg
cgcttggcagattttggtgtcctgcatcgcaatgagctgtcgggagctctcacaggactc
acccgagtacgcaggttccagcaggacgatgctcatatcttctgtgctatggagcagatt
gaagaggagataaagagctgtctggggttcttgcgcaccgtgtatgatgtctttggattt
tcatttaaactgaatctctccactcgtcctgaaaagtacctgggagatattgaagtgtgg
aataaagctgaaaagcaacttgaaaacagcctcaatgcctttggtgagaaatgggagtta
aaccctggtgatggagctttctatggacctaagattgacattcagattaaggatgccatt
ggccgctaccaccaatgtgctacaattcagcttgacttccagttgccagtcagatttaat
ctcacctttgtcagccatgatggcaatgacaagacaagaccagttatcattcatcgggct
atcttgggatccgtggagagaatgattgccattctaacagaaaactatggaggcaaatgg
ccactctggctgtctccacagcaagtaatggtggtaccagtgggaccagcatgtgatgaa
tatgctcaaaaggttaggcagcacttccatgatgctggatttatggcagatgttgatgta
gatcctgggtgcacactgaacaagaagatcagaaacgctcagattgcacaatataacttt
attctggttgttggtgaaaaggagaaggcaagtggaacagtgaacatccgcacccgagac
aacaaggtccatggggaaagaaccattgcagacactgtggagaggctgctgcagctgaaa
tgttctcgttccagacaagctgaagaagaattttaa
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