Lonchura striata (white-rumped munia): 110484209
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Entry
110484209 CDS
T05897
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110484209 (ZFR)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110484209 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
110484209
NCBI-ProteinID:
XP_021410367
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All DBs
Position
Z:complement(35474428..35521406)
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AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYSGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAAAAAAAAATAAWT
GTTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKA
SQNTTNNNTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTE
PNVVTQATSSTSTSASKPTASASNIATTSSTVNSSVASSAVKILTPTANTPLNAVSNNKT
SSTAANIAVKKISTPKINFVGKYRSGNKLQTTGSKMEEMKSAESVKTPPAATVQTQEVKP
DTAAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLK
GRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRY
EEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSS
DDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTDHEKSKNKEGDDKKDGSKD
RALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDI
KCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDA
LAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQ
SPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLA
FRQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttggattcacccacagcggggctgctgcccagtac
agccagcagccagcttcgggtgtagcctactcccatccaaccacagttgccagctacaca
gtccaccaggccccggtggcggcgcacacggtcactgcagcctatgccccggctgcagcc
acagtggcagtggccaggcctgccccggtggctgtggcagctgctgccacagctgccgcc
tacagcgggtatcccacagcacacacagctacagactacggctacacacagcggcaacaa
gaagctccaccaccaccacctcctgtcaccacgcagaattaccaggattcctactcttac
gttcgatctaccgccccagctgtggcatacgacagcaaacaatattatcagcagccaacc
gcgaccgcagcggccgtggctgctgctgcccagccacagccttcagtggctgagtcctac
taccagacagctccaaaagcaggatatagccaaggggcaactcagtacacccaagcccag
caaacacgtcaagtgacagctataaaacctgcaaccccaagtccagcaacaacaacattt
tccatatatccagtgtcctcgactgtgcagccagtggcagctgcagccactgttgttcca
tcctatactcagagtgcgacatacagcacaacagcagtaacttactctggtacctcctat
tctggctatgaagctgcagtttattcagctgcatcatcctattaccaacagcagcagcag
cagcaacagaaacaggcagcggcagcagctgctgctgctgctgcaacagctgcttggacg
gggaccacctttactaaaaagacaccattccaaaataagcaactgaaaccaaaacagcct
cccaaaccaccccagatccactactgtgacgtttgcaagatcagctgtgctggaccacag
acttacaaagaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagct
tcccagaacaccaccaacaacaatacttctgctcgtggaactcagaatcagttgcgctgt
gagctctgtgatgtgtcttgcaccggggcagatgcttatgctgcccatatccgtggagcc
aagcatcagaaagtagtaaagttgcatacaaaacttggcaagcccattccttcaactgaa
ccaaatgtagttacccaagctacttcctcaacatctacatctgcttccaaaccaaccgcc
tctgcttcaaatatagcaactaccagcagtacagtgaactcctctgttgcatcctctgca
gtgaaaattcttactcccacggcaaacacaccacttaatgctgtgtccaacaacaaaaca
tcttcaactgctgcaaatatagctgtaaagaaaatatctacaccgaaaataaactttgtt
ggcaagtacagaagtggtaataagcttcagacaacaggaagtaaaatggaagaaatgaaa
tcagctgaaagtgttaaaacacctcctgctgctacagtgcaaacacaggaagtaaaacct
gacacagcagctgaaccagtgactcccacaactcttgctgctttgcaaagtgatgtccaa
ccagtgggccatgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgtttt
cactgtaaactctgtgaatgcagttttaatgatcctaatgccaaggagatgcatttgaaa
gggcggcggcacagacttcagtacaagaaaaaagtaaacccagacttacaagtagaagta
aagcccagtattcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaag
gaagaatactggagaaggcgagaagaggaggaacgctggaggatggaaatgaggcgatat
gaagaggacatgtactggaggagaatggaggaagagcagcatcactgggatgaccgtcgc
agaataccagatggaggttatcctcatggccctccaggaccactaggtctgctgggagtt
agacctggaatgcctcctcaaccacaaggacccgctcctctgcgccgccctgactcctct
gacgaccgctatgtgatgaccaagcatgctgctatatatcctactgaggaggagcttcag
gcagtccaaaaaattgtttctattactgagcgtgctttgaagctggtttctgacagcatg
actgatcatgaaaaaagcaagaacaaagagggagatgacaaaaaggatggcagtaaagac
agagctttgaaaggcgttttacgggtaggcgttttggcaaaaggtttgctactccgtgga
gaccgaaatgtcaatcttgttttgttgtgtgctgagaagccctccaagacattactcagt
cgtattgctgaaagcctccctaagcaacttgcagtaataagtccagagaaatacgatatc
aagtgtgcagtcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaa
gttacaatcacactgacatctccagtcattcgggaagagaacatgagggatggagatgta
acctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgct
ctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgt
gtgattatcatacgtattcttcgtgatctctgtcagagagttcctacttggtctgatttt
ccaagctgggctatggagctgctcgtggaaaaagcaattagcagtgcgactgggccacag
agtcctggagatgcattgcgaagagtttttgagtgtatatcttcaggaatcatccttaaa
ggtggtcctggccttctggacccttgtgaaaaagatccttttgatacacttgctgtaatg
acagatcagcaacgagaggatattacttcaagtgcacagtttgcgctgagactccttgca
ttccgtcagatacacaaagttctaggaatggatccgttaccacagatgaatcaacgcttc
aacatccataataatcgtaaaaggagaagggacagtgatggggttgatggatttgaagca
gagggaaagaaggacaaaaaagattatgataacttttaa
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integrated database retrieval system
