Lonchura striata (white-rumped munia): 110484247
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Entry
110484247 CDS
T05897
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04020
Calcium signaling pathway
lsr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110484247 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110484247 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lsr04030
]
110484247 (PTAFR)
G protein-coupled receptors [BR:
lsr04030
]
Rhodopsin family
Others
Platelet activating factor
110484247 (PTAFR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
Serpentine_r_xa
Motif
Other DBs
NCBI-GeneID:
110484247
NCBI-ProteinID:
XP_021410447
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Position
23:complement(2719833..2724565)
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AA seq
355 aa
AA seq
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MMSGKGKGGAEGSADVYISCHIDSEFRYSLFTVFYSIIFILGFVANCYVLWIFTHIYPTK
KLNEIKIFMVNLTVADLLFLITMPMWIVYYHHHGDWIMPDFLCNVAGCLFFVNTYTSVAF
LMVITYNRYQAVTNPIKAAQLTTQRRGIYLSAAIWIIIVGSSLYYLFDNNTNQEEVDSRN
FTRCFERYDTTSGVSAVLAIHVIICILFYIIFLLILGWNIVIIRTLFSKSVHPKKSAHVK
QRALWMVCTVLSVFIISFVPHHIVHLPWTLTVLEQWKKENCQLRQQLNDAHQVTLCLLST
NCVLDPIIYCFLTKKFQKHVSENLRSMKGSRKCSRQTTDTMIEGTIHQEDAIRIG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggaaaaggcaaaggaggtgcagaaggcagtgctgatgtctacatttcatgc
cacatagactctgagtttcgctacagcctcttcactgttttctacagcattatcttcatt
ctaggctttgttgccaactgctatgttctctggattttcacccatatttaccccaccaag
aaactcaatgaaatcaagatattcatggtgaacctgacagtagctgacttgctcttctta
attacgatgccaatgtggattgtttactaccaccaccatggagactggatcatgcctgac
ttcctttgtaacgtggctggctgtttattttttgttaatacctacacttctgttgccttt
ctgatggtcatcacatacaaccgttaccaagctgtgactaatcctattaaagctgctcag
ctgaccacccagagaagaggtatctacctatcagcagctatctggatcataatagtgggc
agctctttgtattacctttttgacaataatacgaatcaggaggaggtggactccaggaat
ttcacgcggtgctttgagcgctatgacaccacgagtggtgtttcagctgttctcgccatt
catgtcatcatctgcatcctcttctatatcattttccttttaatactaggttggaacatt
gtcattatcaggaccctgttctccaagtcagtgcatccaaagaaaagcgctcatgtcaag
cagagggccctctggatggtgtgcacagtgctgtctgtgttcatcataagctttgtgccc
catcacatcgtgcacctgccctggactctgacggttctggagcagtggaagaaggaaaac
tgtcagctgcgccagcagctcaacgatgctcaccaggtgactttgtgcctcttgagtacg
aactgtgtgttggacccgatcatctactgcttcctcaccaagaagtttcagaagcatgtt
tcagaaaacctgagaagcatgaaagggagtcgcaaatgctccaggcaaacaactgatacg
atgattgagggcaccattcaccaagaggatgccattaggatcggttag
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