KEGG   Lonchura striata (white-rumped munia): 110484277
Entry
110484277         CDS       T05897                                 
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110484277 (ZC3H12A)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110484277 (ZC3H12A)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 110484277
NCBI-ProteinID: XP_021410488
LinkDB
Position
23:complement(3521106..3529296)
AA seq 620 aa
MSAGSLAPGWPEALPPARPAAGMSRGPAGPGDGPELQLKVDFFRKLGYSSEEIRGVLQKL
GLGADTNTVLGELVKHGPAERDGPEAPPEPAEAPLVPRGGAGNKSPAPGPEETESDNLKP
IVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQH
ILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERPEWK
KFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIK
CKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESDKSS
LQKVSAERKSLAHKAKPSDVVLQAKGCVSGSVSPDRYQQPPMDSLSYISQEHLDSGIGSL
ENQLSDMWPHRCTSHCDHSHAEQVPVCTCGGQRPVYPHSPSLEQNGLVSYNHGSHKSSSS
GASFLQYSPELPRSGAAHSFSGYGVPVPAGAAGQYSLPGEFGAAVPRSREFWSEPYPLPR
ARSPGVHSPHAAHRAPAYGDSGPWAAEEQFAEERARVHVKLCSIFHPHLVDAVMSRFPRL
LDPQRLAAEILTYKAQNPGV
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgagcgcgggcagcctcgccccgggctggcctgaggcgctgccgcccgcccggcccgcc
gcggggatgagccggggccccgcggggcccggcgacggccccgagctgcagctgaaggtg
gatttcttccgcaagctcggctactcctcggaggagatccgcggcgtgctgcagaagctg
ggcctgggcgccgacaccaacacggtgctgggcgagctggtgaagcacggcccggccgag
cgggacggccccgaggcgccgcccgagcccgccgaggccccgctggtcccgcggggcggc
gccggcaacaaatccccggcgcccggccccgaggaaacggagagcgacaacctgaagccc
atcgtcatcgatggcagcaacgtggccatgagccatgggaataaagaagtgttctcctgc
cgaggtatccttctggctgtccagtggttttgggacaggggacacaaggatattacagtc
tttgtgccatcatggaggaaggagcagccccgaccagatgtactcataacagaccagcac
atcctgcgtgacctggagaagaagaagatcctggtgttcacgccgtcgcggcgggtgggc
ggcaagcgcgtggtgtgctacgacgaccgcttcatcgtgaagctggcccacgagtccgac
ggcattgtggtgtccaacgacacctaccgcgacctgcagaacgagcggcccgagtggaag
aaattcatcgaggagcgcctgctgatgtactccttcgttaatgacaagtttatgcctcca
gatgatcccttagggcgtcatggccccagcctggacaacttcctcaggaagaaacctgta
gttccagaacacaagaaacagcagtgcccttacgggaaaaaatgcacttatggaattaag
tgtaagttctaccatcctgaaaggatcaaccagccccagcgctcgttagctgatgaactc
cgtgccaatgccaggctgtctccaaccagaagtaccagtgccaaggaggagaagaagggg
aagcggggttcccaggcagagctcttgtgctcagtgcccacagagagtgacaaaagctct
ttacagaaggtctctgcagagaggaaaagcttggcccacaaagccaagcccagtgatgtt
gtgcttcaggccaaaggctgtgtgtcaggcagcgtctctcctgacaggtaccagcagcct
cccatggactctctgtcttacatctcgcaggagcatctcgactcaggcattgggtctctg
gagaaccagctgtctgacatgtggcctcacaggtgtaccagccactgtgaccattcccat
gcagagcaggtgcccgtctgcacctgcggtgggcagagacccgtctacccgcattccccc
agcttagagcagaacggtctggtctcctacaaccacggctcccataaatcttcttcctct
ggtgctagcttcctgcagtacagccctgaactgcctcgctcgggagcagcccactctttc
tcaggctatggggtgcccgtgcccgccggtgctgcggggcagtacagcctgcctggcgag
ttcggcgccgccgtgccgcgctcgcgggagttctggtccgagccgtacccgctgccgcgg
gcgaggtcccccggcgtgcacagcccccacgcggcgcacagggccccggcctacggggac
tcggggccctgggctgctgaggagcagttcgccgaggagcgggccagggtgcacgtcaag
ctgtgcagcatcttccacccgcacctggtggatgccgtgatgagccgcttcccccggctg
ctggacccccagaggctggcagcagagatcctcacctacaaggcccagaacccaggtgtg
tga

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