Lonchura striata (white-rumped munia): 110484277
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Entry
110484277 CDS
T05897
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110484277 (ZC3H12A)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110484277 (ZC3H12A)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
110484277
NCBI-ProteinID:
XP_021410488
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Position
23:complement(3521106..3529296)
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AA seq
620 aa
AA seq
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MSAGSLAPGWPEALPPARPAAGMSRGPAGPGDGPELQLKVDFFRKLGYSSEEIRGVLQKL
GLGADTNTVLGELVKHGPAERDGPEAPPEPAEAPLVPRGGAGNKSPAPGPEETESDNLKP
IVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQH
ILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERPEWK
KFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIK
CKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESDKSS
LQKVSAERKSLAHKAKPSDVVLQAKGCVSGSVSPDRYQQPPMDSLSYISQEHLDSGIGSL
ENQLSDMWPHRCTSHCDHSHAEQVPVCTCGGQRPVYPHSPSLEQNGLVSYNHGSHKSSSS
GASFLQYSPELPRSGAAHSFSGYGVPVPAGAAGQYSLPGEFGAAVPRSREFWSEPYPLPR
ARSPGVHSPHAAHRAPAYGDSGPWAAEEQFAEERARVHVKLCSIFHPHLVDAVMSRFPRL
LDPQRLAAEILTYKAQNPGV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcctcgccccgggctggcctgaggcgctgccgcccgcccggcccgcc
gcggggatgagccggggccccgcggggcccggcgacggccccgagctgcagctgaaggtg
gatttcttccgcaagctcggctactcctcggaggagatccgcggcgtgctgcagaagctg
ggcctgggcgccgacaccaacacggtgctgggcgagctggtgaagcacggcccggccgag
cgggacggccccgaggcgccgcccgagcccgccgaggccccgctggtcccgcggggcggc
gccggcaacaaatccccggcgcccggccccgaggaaacggagagcgacaacctgaagccc
atcgtcatcgatggcagcaacgtggccatgagccatgggaataaagaagtgttctcctgc
cgaggtatccttctggctgtccagtggttttgggacaggggacacaaggatattacagtc
tttgtgccatcatggaggaaggagcagccccgaccagatgtactcataacagaccagcac
atcctgcgtgacctggagaagaagaagatcctggtgttcacgccgtcgcggcgggtgggc
ggcaagcgcgtggtgtgctacgacgaccgcttcatcgtgaagctggcccacgagtccgac
ggcattgtggtgtccaacgacacctaccgcgacctgcagaacgagcggcccgagtggaag
aaattcatcgaggagcgcctgctgatgtactccttcgttaatgacaagtttatgcctcca
gatgatcccttagggcgtcatggccccagcctggacaacttcctcaggaagaaacctgta
gttccagaacacaagaaacagcagtgcccttacgggaaaaaatgcacttatggaattaag
tgtaagttctaccatcctgaaaggatcaaccagccccagcgctcgttagctgatgaactc
cgtgccaatgccaggctgtctccaaccagaagtaccagtgccaaggaggagaagaagggg
aagcggggttcccaggcagagctcttgtgctcagtgcccacagagagtgacaaaagctct
ttacagaaggtctctgcagagaggaaaagcttggcccacaaagccaagcccagtgatgtt
gtgcttcaggccaaaggctgtgtgtcaggcagcgtctctcctgacaggtaccagcagcct
cccatggactctctgtcttacatctcgcaggagcatctcgactcaggcattgggtctctg
gagaaccagctgtctgacatgtggcctcacaggtgtaccagccactgtgaccattcccat
gcagagcaggtgcccgtctgcacctgcggtgggcagagacccgtctacccgcattccccc
agcttagagcagaacggtctggtctcctacaaccacggctcccataaatcttcttcctct
ggtgctagcttcctgcagtacagccctgaactgcctcgctcgggagcagcccactctttc
tcaggctatggggtgcccgtgcccgccggtgctgcggggcagtacagcctgcctggcgag
ttcggcgccgccgtgccgcgctcgcgggagttctggtccgagccgtacccgctgccgcgg
gcgaggtcccccggcgtgcacagcccccacgcggcgcacagggccccggcctacggggac
tcggggccctgggctgctgaggagcagttcgccgaggagcgggccagggtgcacgtcaag
ctgtgcagcatcttccacccgcacctggtggatgccgtgatgagccgcttcccccggctg
ctggacccccagaggctggcagcagagatcctcacctacaaggcccagaacccaggtgtg
tga
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