Lonchura striata (white-rumped munia): 110484398
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Entry
110484398 CDS
T05897
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04217
Necroptosis
lsr04622
RIG-I-like receptor signaling pathway
lsr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110484398 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110484398 (CYLD)
04625 C-type lectin receptor signaling pathway
110484398 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110484398 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110484398 (CYLD)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110484398 (CYLD)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C67
110484398 (CYLD)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110484398 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
110484398
NCBI-ProteinID:
XP_021410673
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All DBs
Position
11:complement(12303898..12330472)
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AA seq
953 aa
AA seq
DB search
MNSGLWSQEKAGSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
AKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDTMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRSGDKGLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSV
DSQPQTKTKSPWYIDEAAEDPSKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFSL
TKTTSTNGTIGHSPLSLSVQSVMGDVNTTATQESPSTASPIGNSHGLEAGSLAEVKENPP
FYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLED
TPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKD
LPDWDWRHGCIPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagcaggttcatcctattgggaagagcggatc
ttttacttgcttctccaagaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtggcacactccaga
aatattccatgtaaaggcaagaaactgcagattggattaaagattctggaacaacctcat
gcaatcttgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttctggctattactaactgtgaggaaagatacagtttgtttaagagcaaaagcaggtta
gctaaaggagtccagatagatattggctcacctgttagagtacagctgagatcaggggat
gagaaatatcctggagttgttcgcttcaggggacccttaatgcaagaaaggtccctaaca
gggatatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagttggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacacaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatggcacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatccgattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagcacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaagtggtgacaaaggcttgttcaatcatagtaagccaaaggctataggatctacc
tctgaacctggaaatagaagcagatctgaagtgttctacacattaaatggctcatcagtt
gactctcagcctcaaacaaaaacaaaatccccatggtatattgatgaagctgctgaagac
ccttcaaagtcacttactgattcatctcctggatttggacattcttcaccaccactgcag
ccacctttaacaaattctgtgtctacagaaaacagatttcactccctcccctttagcttg
acaaaaacaacaagtactaatggtactattggacatagtcctctctctttatctgttcag
tctgtcatgggtgatgtgaatactacagctacccaggagagtccatcaacagcaagccca
attggaaactcacatggtcttgaagcaggttccttggctgaagttaaagaaaatcctcct
ttctatggagtaatccgctggattggccagccccctggagtaaatgaagtattagcagga
ctggaactggaagatgaatgtgcaggctgcacggacgggacatttaaaggaactcgatac
ttcacgtgtgctccaaagaaagctctttttgttaaactcaaaagctgcaggccagactcc
aggtttgcctcgctccagcctgtttccaaccagatcgagcgctgcaactctctagccttt
ggaggttacctaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaaggt
ttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttactta
gactccaccttattctgcctgttttcttttagctctgttttggacactgtgctactcaga
cctaaagaaatgaatgatgtagagtattatagtgagactcaggagctgctgcggacagag
attgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactgagg
aaaatacttgaaaaagttgaagctgcatcaggattcacttcagaggaaaaagatccagaa
gaatttttgaatattttatttcaccatattctgagagttgagccactgttgaaaataaga
tcagcaggtcagaaagtacaagactgttatttctatcagatttttatggacaaaaatgag
aaagttggagtcccaacaattcagcagttactggagtggtcattcatcaacagcaacttg
aagtttgcagaggcaccctcttgcctgattatccagatgccccggtttggaaaagacttc
aaaatgttcaataaaatttttccatccttggaattaaatataacagacttacttgaagac
actcccaggcagtgccgtatctgcagagggctcgctatgtacgaatgcagggagtgttat
gaagacactgatatttctgctggcaaaatcaagcaattctgcaaaacatgcaatacacag
gttcatcttcaccccaagagacagagtcataaattcaatccattgtcgcttccgaaggac
ctgccagactgggactggcggcacggctgcatcccctcgcagaagatggagctgtttgca
gtgctgtgcatcgagaccagccactacgtggccttcgtcaagtacggcagggacgactca
gcctggctcttcttcgacagcatggcagatcgggatggaggtcagaatggctttaacatt
ccacaagttaccccatgtccagaagttggtgaatacctgaagatgtctctagaagaattg
cactcactggattccaggaaaatccaaggctgtgcacgaagactgctttgtgatgcttac
atgtgcatgtatcaaagtccaacaatgagtttatacaaatga
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