Lonchura striata (white-rumped munia): 110484411
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Entry
110484411 CDS
T05897
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110484411 (IRX5)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110484411 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110484411
NCBI-ProteinID:
XP_021410693
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Position
11:complement(10306337..10310117)
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AA seq
473 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAADPKAAPGCERLQESPGPRE
AESGLSDSDCKELAEERLDGPPVPHKAPGASPLGPCPAGRGPPPAGGEEPPPYRPPSAAA
GPPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPA
VLGGSGPSRSPPRPRSPAAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGP
AAAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgctgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggctggttccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggaccccgcgtaccgcaagaacgcg
acgcgggacgccacagccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcggcggcggctcaagaaggagaacaaaatgacctggacc
ccaagaaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccggaactccggacacaggagcg
gcggatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccggcccccgggag
gccgagagcggcctcagcgactcggattgcaaagagctggcggaggagcggctcgacggg
ccgcccgtcccccacaaggcgcccggcgcttccccgctgggaccgtgtccggcgggccgc
gggccgccgccggcgggcggcgaggagcccccgccgtaccgcccgccctccgccgccgcc
gggccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctctgtc
atccactcgccgcagcaggcggccctcgccaagcccaagctctggtcgctggccgagatc
gccacctcggcggacaaggctaaggaggccggcggcgaggcggcaccccccggccccgcc
gtgctgggcggcagcggcccgtcccgctcgccaccgcggccgcgctcgccggccgcgcag
tgccccttccccaacggggcggtcctgccccggccgctctactacacggcgcccttctac
cccggctacacgaactacggctccttcggggccctgcacgggcaccccgccggcggcccc
gccgccgccgcccccggcgcccacttcaatggattaaatcagactgtcctcagcagagcc
gagagcctggcaaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaa
gactcaccttacgaactgaagaaaggtatgtccaacatttaa
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