Lonchura striata (white-rumped munia): 110484459
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Entry
110484459 CDS
T05897
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
110484459 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110484459 (RAG1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110484459 (RAG1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110484459 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Caud_bapl16_3rd
Motif
Other DBs
NCBI-GeneID:
110484459
NCBI-ProteinID:
XP_021410775
LinkDB
All DBs
Position
5:complement(42945234..42948356)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSAASQMDLPEELQHTYTKFSEWKFKLFKLRSFEKTPSDDSQHIHKDQAEEAVSSNKEII
LHKDEAVPRGEKTELTGNRQGLEEDAHAMKTQDIRAHQNNLKQLCRICGVSFKTDCTKRT
YPVHGPVDDETLCLLRKKEKTATSWPDLIAKVFKTDVRGDVDTIHPTRFCHNCWSIIHRK
FSNTLCEVYFPRNSTMEWQPHSPNCDVCHTTRRGIKRKSQPPSVQHGKRVKTTVERAQLN
RGVKNQQLKQAQINNKNLMKEIVNCKDIHLSTKLLAVDYPVDFIKSISCQICDHILADPV
ETTCRHLFCRTCILKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLNIRCPVKECD
EEISHGKYGQHLSGHKEMKEGELYSYINKGGRPRKHLLSLTRRAQKHRLRELKRQVKAFA
EKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCS
QYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLS
GLPLSIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGLKAKNLDDYLNGPFTVVVKESC
DGMGDVSEKHGSGPAVPEKAVRFSFTVMNISIEHGNESKRIFEEVKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKNSELLLEMGGILRTFRFIFRGTGYDEKLLREVEGLE
ASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGV
SAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRK
KMNLKPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPA
KECPELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQSFTIDSG
GSLGDSLPLEVLENSDTAEL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcatcacaaatggacctacctgaagaacttcagcatacatatacaaaattt
tctgaatggaaattcaagctctttaaattgcgatcatttgaaaaaacaccctctgatgac
agccagcacatacacaaagatcaggcagaagaggctgtttcttcaaacaaagaaatcatc
ctgcataaagacgaagcagtgccaagaggagaaaagacagagttaacaggcaataggcag
ggacttgaggaagatgcccatgccatgaaaacacaagacattagagctcatcagaacaat
ctgaaacaactctgccgcatctgtggggtttcatttaaaactgattgtaccaagagaact
tacccagtgcatggaccagtggatgatgaaactctgtgccttctgagaaagaaagaaaaa
actgcaacctcttggccagatcttattgctaaggttttcaagactgatgtgcgaggggat
gtcgacactatccatcctactcgattttgtcataactgttggagtattatacacagaaaa
ttcagtaatactctgtgtgaagtgtattttcctaggaacagcacaatggagtggcaaccc
cattccccaaactgtgatgtctgccatactaccagacgaggaatcaagaggaaaagccag
cccccaagtgtgcaacatggcaaacgtgtcaaaaccactgtggaacgtgctcagctaaac
agaggtgtaaaaaaccaacaactcaaacaagcacagataaataacaaaaatttaatgaaa
gagattgtcaattgcaaggatatacatctcagcaccaagctgcttgcagttgattaccca
gtagatttcattaaatccatttcttgccaaatttgtgatcatattttggcagatccagtg
gaaacaacatgcagacacttgttttgcagaacttgcatccttaaatgtatcagggttatg
ggcagctattgcccctcctgctggtatccttgctttccaactgatctggtaaccccagtg
aaatccttcctgaacatccttgataatctgaatataagatgccctgtaaaggaatgtgat
gaagagatctcacatggaaaatatggccaacacctctctggccacaaggagatgaaagaa
ggagagctctatagctacatcaataaaggtggccgaccgaggaagcacctcctgtccttg
acgaggagagctcagaaacatcgtctgagggaactgaaacgtcaagtcaaggcttttgct
gagaaagaagagggtggtgacataaaagctgtatgcatgactttgttcctgctagctttg
agagcaaaaaatgaacacaaacaagcagatgaactggaggctataatgcaagggagggga
tctggacttcatcctgctgtttgtctggccatccgaattaacacgtttctcagctgtagt
cagtatcataaaatgtatagaacagtgaaagctgtcactgggaggcagatcttccagcct
ttgcatgctcttcgcactgctgagaaagccctcctcccaggttatcacccatttgagtgg
aaacctcccctgaaaaatgtatccactaacacagaagtgggaattatagatggactatca
ggactgccgctctcaattgatgattatccagtagacacaattgcaaagagattccgatac
gatgcagccttggtttgtgccttaaaggacatggaggaggagatcttggaaggcctgaaa
gcaaaaaacctggatgactatttgaatggccccttcactgtggtagtaaaagagtcctgt
gatggaatgggagatgtcagtgagaagcatggaagtgggcctgctgtcccagagaaggct
gttcgcttttctttcacagtcatgaacatttctatagaacatgggaatgaaagcaagagg
atctttgaggaagtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctg
gctgatgaatcagatcatgaaactctgacagcaatcctgagccccctcatagcagaaaga
gaggctatgaaaaacagtgaactgctgcttgaaatgggaggcatcctgaggacatttaga
tttatctttaggggtacgggatatgatgagaaactcttgcgggaagtggaagggctggag
gcctcaggttccacttacatttgtaccctctgtgatgcaacccgcttggaggcctcccag
aatctggtcttccactccataaccaggagccatgctgaaaatctggagcgatatgaaata
tggaggtccaacccataccacgagtctgttgatgagctccgtgacagagtgaagggtgtt
tcagccaaaccttttattgagactgttccctccatagatgcattgcactgtgacattggc
aatgctacagaattctacaggattttccagatggagattggtgaactttacaagaatcct
gatgtatctaaagaggagcggaagaggtggcagttgactctggacaaacatctcaggaag
aagatgaacttgaagcccatgctgaagatgagtggaaattttgctagaaagctcatgtcc
aaagagactgtagaggcagtatgtgaattaattaagtgtgaggaaaggcatgaagctcta
aaagaactaatggacctttatctgaagatgaagccagtgtggcgatcctcatgccctgcc
aaagagtgtcctgaactgctgtgccagtatagctacaattcacagcgttttgcagagctc
ttatctacaaagttcaagtacagatatgagggcaagattacaaattatttccacaaaaca
cttgctcatgttcctgaaatcattgaaagagatgggtccattggggcctgggcaagcgag
ggaaatgagtctggaaacaagctgtttaggaggttccgaaaaatgaatgccaggcagtct
aaggtctatgagatggaggatgtcttgaagcaccactggctgtatacttccaagtacctc
cagaagttcatgaatgctcataaaacattaaaaagccagagcttcaccattgattcaggg
ggtagtttaggtgactccttgccactggaggtcttggaaaacagtgatacagcagaactc
taa
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