Lonchura striata domestica (Bengalese finch): 110484517
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Entry
110484517 CDS
T05897
Symbol
ZBED4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110484517 (ZBED4)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110484517 (ZBED4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
110484517
NCBI-ProteinID:
XP_021410909
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All DBs
Position
1A:complement(45836311..45862072)
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AA seq
1172 aa
AA seq
DB search
MDMSKGDSLGMDDTFVLGKINNLKVEQEDDSINCTLERTDIKTEQDDFKHADSSDEQEDK
ERNFITNNSGKYLSTENEDDYGSLFSQYSNTLYDVAMEAVTQSLLSSRNISSRKKSPAWN
HFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQENGTMPGISSF
SSSTLLLPPQSADVGDLSSMLSPIKLVKKMASKIPSPDRIIEESVSIVSSEEISDLSVSE
KCSKEEVMAGSSPQQANNQYDDTVENVAEKTVVIPKSASGSRRRSAVWKHFYLSPLDNSK
AVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRSIVLQENGGGTSIPPLYTAPPTLLPSL
LPSESDLNSMSSSPGKLMKEPTSVSSSPDRISEEIHANLTSGDTLVEDSILSSSDDIGEV
SFVSSPEKQCEGLGPLIFEPTAVFQQNKRIMKRLKSEVWHHFSLSPADSLKAVCRYCSCM
ISRGKKGDVGTSCLMRHLYRRHPDVIGNQKSFLDVSLANSPYATLASAECSSSKLTDLPT
MVTHDNQIIFPVNSKKTSKLWNHFSICSADSTKVICTHCGRIISRGKKPTNLGTSCLLRH
LQRFHNNVLKPDVPDTVLSSSTDNHMPLRTELLGSSNFDETNDKFCDSHPVAKKITSLVA
EMIALDLQPYSFVDNIGFNRLLEYLQPQYSLPSPSYFSRTAIPDMYDNVKQIIISHLKEA
ESGVIHFTSGIWMSNQTREYLTLTAHWVTFESSFRPQCEDYHCSALLNVSQIDCDYNGIS
VQKQLEYWWETWITSIGLQIGITVTDNQSIEKTLNEGDHSSVQCFSHTVNVIVNEAIKSQ
RMVQNLLSIARKICERVHRSAKAKEKLAELQKEYELPQHQLIQDVPSKWNTSFHMLERLI
EQKRAIDEMSIECSFRELISCDQWEVMQSVCHALKPFEAASREMSTHMSTLSQVIPMIHI
LNRKIEMLFEETMGIDTMLKSLKEAMVSRLSSTLHDPRYIFATLLDPRYKTSLFTEEEAE
QYKQDLIRELEIMSSTSDDDKPVSNGCDIGSPSTNSYGEDNLWSLMGDMKKTKDLKERAK
LPEEMVLSYLEEEVLEHNCDPLTYWNFKKSSWPVLSKLAVRFLGCPPSIVPSERLFNTSN
ESNNFSQSRLMIEHFEKLIFLKVNLPLIYFQY
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagtaaaggagattccctcggaatggatgatacttttgtattgggtaaaatc
aataacttgaaagtagagcaagaagacgacagcattaactgtactctagaaagaacagat
ataaagacagaacaagatgatttcaaacatgcggacagcagtgatgaacaggaagacaaa
gaaaggaacttcattaccaacaactctggcaaatatttgtctacagaaaatgaagatgat
tatggatctcttttttctcagtatagtaatacgctgtatgatgtagcaatggaagctgtg
acacaaagcctcctttctagcagaaatataagctccagaaaaaagtcacctgcttggaac
cattttttcatatctcctagagatagcactaaagcaatatgtatgtactgtatgaaagaa
tttagcaggggtaaaaatgaaaaggacctgagtacaagttgtctcatgagacatgtgagg
agagcacatcccactgtgctaattcaagaaaatggaactatgccaggtatatcttccttt
tcttcatctacgttattgctgccacctcagtctgcagatgttggagatctgagttctatg
ttatcccccataaaactggtcaagaaaatggcttctaaaataccatctccagatcgaata
attgaggaatctgtttctattgtttcttctgaagaaatatcagatctctccgtttctgaa
aagtgcagcaaagaagaagtcatggctggttcatctccacagcaagccaataaccaatat
gatgacactgttgagaatgtagcagaaaaaacagttgtaattccaaagagtgcatcaggt
tctagaagaagatctgctgtctggaaacacttctatttgtcacctctagataattctaaa
gctgtttgcatccactgcatgaatgaattcagtagaggtaaaaatggaaaagacctagga
acaagttgtttaataagacacatgtggagagcccatcgttccattgtcctgcaagagaat
gggggtggtaccagcataccacctctctacaccgcacctcctactctcttgccttcttta
ctaccatcagagagtgatctgaattctatgtcatcctctcctggaaaactaatgaaagaa
ccaacttctgtttcttcttctccagacagaatctctgaggagatccatgctaatctcact
tctggagacactctagttgaagactcaatactgtcatcttctgatgatataggtgaagtc
tcctttgtttcatctcctgaaaaacagtgtgagggacttggtccactaatatttgaacct
actgctgtgtttcagcaaaataaaaggattatgaaaaggcttaagtcagaagtctggcac
cacttttcactctcacctgcagacagtctaaaagcagtatgtagatactgcagttgtatg
ataagccgtggtaagaaaggagatgtgggcacaagctgcttaatgaggcacctatataga
cgccatcctgatgtaattggaaaccaaaagagctttctcgatgtgagtttggcaaattca
ccttatgccactttggcttctgcagaatgctcatcctcaaagttgactgacttgcctacg
atggttacacatgataatcaaattatatttcctgttaatagtaagaagacctcaaaactg
tggaatcacttttcaatttgttctgcagattcaactaaagtaatatgtacacactgtgga
cgtataataagtagggggaaaaagccaacaaacctaggcacaagttgccttctaagacat
ttgcagcggtttcataacaatgtattgaaacctgatgtcccagacacagtcttatcctca
tctacggataatcatatgccactccgcacagaattactaggatcttcaaattttgacgaa
accaatgacaagttttgtgactctcatccagttgccaaaaaaatcacaagtcttgtagcc
gaaatgattgcacttgatcttcagccatattcttttgtagacaacattggctttaacagg
ctgcttgaatatttgcaacctcagtattctttaccttctccatcttacttttctaggaca
gcaattccagatatgtatgataatgtaaaacaaataattatttcacatcttaaagaagct
gaaagtggagtgatccattttacatctggaatatggatgagcaaccaaacacgagaatat
ctaaccctgaccgctcactgggtaacatttgagtcttcatttcgaccccagtgtgaggat
taccattgttcagcattattaaatgtatcacagattgattgtgactacaatggaatcagt
gttcaaaagcaactagaatactggtgggaaacgtggattacttccattggacttcagatt
gggattactgttactgataatcagagtatagagaaaactttaaatgaaggtgatcattca
agtgtccaatgttttagtcacactgtcaatgtaattgtaaacgaggctattaaaagccag
agaatggttcagaatttgcttagtattgcaagaaagatctgtgaacgtgtccatcggtca
gcaaaagcaaaagagaagttagctgagttgcaaaaagagtatgagttgcctcaacatcag
ctaatacaagatgttccatcaaagtggaatacgtcatttcatatgcttgaacgccttatt
gaacagaaaagagcaattgatgaaatgtcaatagagtgcagctttcgggagctaataagt
tgtgatcagtgggaagtcatgcagtcagtgtgtcatgctctgaaaccttttgaagctgct
agtagggagatgagtacacacatgtctactctaagccaagtgattccaatgattcatata
cttaacaggaaaatagaaatgctatttgaggaaactatgggcatagatactatgctgaaa
tctttgaaagaagctatggtgagtagattgtcctccacgcttcatgatccaaggtacatt
tttgctacgcttctggatccccggtataaaacatcattatttacagaagaggaggctgaa
caatataaacaagacttaatcagggagctggaaataatgagttctacctcagatgatgat
aaacctgtttccaatggatgtgatataggttcaccatctacaaattcttatggggaagat
aatctctggtcactcatgggtgacatgaagaaaacaaaagacctgaaagagagagcaaag
ttaccagaggaaatggtgctttcttacttggaggaagaagtgcttgagcataactgtgat
cctctaacttactggaactttaagaagtcatcttggccagtactgtcaaaattggctgtc
aggttcttgggttgtccaccaagcattgttccttcagagagattgttcaatacatccaat
gaaagcaacaactttagtcagtcaaggttaatgattgaacactttgaaaagcttatcttt
ttgaaagtgaatcttcctttaatatacttccagtattga
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