KEGG   Lonchura striata (white-rumped munia): 110484647
Entry
110484647         CDS       T05897                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03082  ATP-dependent chromatin remodeling
lsr03083  Polycomb repressive complex
lsr04110  Cell cycle
lsr04330  Notch signaling pathway
lsr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110484647 (HDAC2)
   03083 Polycomb repressive complex
    110484647 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    110484647 (HDAC2)
   04350 TGF-beta signaling pathway
    110484647 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110484647 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsr03036]
    110484647 (HDAC2)
Enzymes [BR:lsr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110484647 (HDAC2)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110484647 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     110484647 (HDAC2)
    BRAF-HDAC complex
     110484647 (HDAC2)
    REST complex
     110484647 (HDAC2)
    SHIP complex
     110484647 (HDAC2)
    MiDAC complex
     110484647 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110484647 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110484647 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    110484647 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110484647
NCBI-ProteinID: XP_021411172
UniProt: A0A218UX81
LinkDB
Position
3:66108462..66132249
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKAKDSSGEKTDAKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctattattacgacggtgatatt
ggaaactattactatggacaaggacatccaatgaaacctcacagaatccgaatgactcac
aacttgctgctaaactatggcttgtacagaaaaatggagatttatcgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggctctgttgct
ggggcagtgaaattgaacagacaacaaacagacatggctgtcaattgggctgggggactt
caccatgccaagaaatcggaggcatctggtttctgttatgttaatgatattgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccaggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatctaaagtaatggagatgtaccagcccagtgctgtggtattg
cagtgtggagcagattcactgtctggggacagactgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggaggctacacaattcgtaatgtggctcgatgctggacatacgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactactttgagtattttggacca
gacttcaagcttcatattagtccttcaaatatgactaatcaaaatacaccagaatatatg
gagaaaatcaagcaacgcttatttgagaacttgcgcatgttgcctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcttgtgatgaagaa
ttttcagattctgaagatgaaggagaaggtggacgacgaaacgttgcagatcataagaaa
ggagcgaagaaagccagaatagaagaagacaaaaaagagactgaggacaaaaaagcagat
gttaaggaggaggataaagccaaggacagcagtggtgaaaagacagacgccaaaggagca
aaatcagaacagctcagcaacccttga

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