Lonchura striata (white-rumped munia): 110484825
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Entry
110484825 CDS
T05897
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110484825 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110484825 (COPB2)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110484825 (COPB2)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110484825 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
110484825
NCBI-ProteinID:
XP_021411420
LinkDB
All DBs
Position
9:19720333..19734404
Genome browser
AA seq
1041 aa
AA seq
DB search
MDAVRVPQDTWSARPAADTAIASILRRGSEGPAVISALGDSDRVLSHAVSPRPPASPAPT
TTPTLPRAAGPGAADYTSRHATGAPALASLRGGAVARAEPGSSTSVIGAGAGPGPERGRR
AAARHSGAMPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKN
FEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQP
FILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL
GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNV
SCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDE
GSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCE
IYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVV
KIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSD
SGELVCIATEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGD
CFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVL
EYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLG
ELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMV
NKLAEGAEKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKL
WRENLSKVNQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEE
RNLLEEAKGFEPSGIMTSQKKAEEPVPSPKQEVMKTVVQNSDNLPARDQKTLLDLEDDLD
NLDLEDIDTTDINLDEEILDE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcagagtgcctcaggacacttggtctgctcggcctgcagcagacacagca
atcgccagcatcctccggaggggaagcgaggggccagcagtgatctctgctcttggtgac
agcgacagggtgctgtcccacgctgtgtccccgcggccgccagccagccccgcgccgact
acaactcccaccctgccccgcgccgcggggcctggcgccgccgactacacgtcccggcat
gccacgggagcgcccgctctcgcgagcctgcggggcggcgctgtggcgagagcggagccc
ggaagctccacgtcggtgatcggggccggagcggggccggggccggagcggggacggcgg
gcggctgctcggcacagcggggccatgcctctgcgactggacatcaagcggaagctgacg
gcccgctctgaccgcgtgaagagcgtggacctgcatcccacggagccatggatgctggcc
agcctctacaacggcagtgtctgtgtttggaaccacgagacacagactctggtgaagaat
tttgaagtgtgtgacctgcctgtgagagctgccaagttcgtggcaaggaagaactgggtt
gttactggagctgatgacatgcagatcagagtttttaattacaacaccctggaaagagtt
cacatgttcgaggcccattccgactacatccggtgcattgcagtgcaccccacgcagccc
ttcatcctcacgagcagtgatgacatgctgatcaaactctgggactgggacaagaaatgg
tcttgttctcaggtgtttgaaggacacacccattacgtcatgcagattgtcataaaccca
aaagacaataaccagtttgccagtgcttctttggataggacaattaaggtgtggcagctt
ggatcatcctctcccaatttcaccttggaaggccatgagaaaggagtgaactgcattgac
tactacagtggtggggacaagccatacctcatttctggggcagatgaccgtctggtgaag
atctgggactaccagaataaaacttgtgttcagacgctggagggccacgctcagaacgtg
tcgtgtgttagcttccatccggagctgcccatcatcatcactggctctgaagatggcaca
gtgcggatctggcactccagcacttaccgcctggagagcaccctgaactacggcatggag
agggtgtggtgtgtggccagcctgaggggctccaacaatgtggctttgggctatgatgaa
ggcagcatcattgttaagcttggtcgtgaagaacctgccatgtccatggatgcaaatgga
aaaattatttgggctaaacattccgaagtccaacaggctaacttgaaagcgatgggagat
gctgaaatcaaagatggagagaggttgccactggctgtgaaggatatgggcagctgtgaa
atctatcctcagacaatccagcacaaccctaatggacggttcgtggtggtgtgtggtgat
ggtgaatacatcatctatacagccatggctctgaggaacaagagctttggttctgcacag
gagtttgtgtgggcacatgactcttcagagtatgcaatcagggagagcaacagtgttgta
aagatatttaaaaatttcaaagagaagaagtccttcaagcctgattttggagccgaaggc
atctatggtggctttctgttgggagtcagatctgtcaatggcctggcattctatgactgg
gagaatacagagctgattcgcaggattgaaatccagcccaaacatattttctggtctgac
tcgggtgagcttgtgtgcattgctacagaagagtcattcttcattctcaagtacctgtca
gaaaaagtggcagcagcccaagaaacacatgaaggggtcactgaagatggaattgaagat
gcctttgaggttcttggtgagatccaggagattgtgaaaacaggtctgtgggtcggtgac
tgctttatttacaccagttctgtgaacagactcaactactacgttggaggagagattgtc
accattgcccacctggacagaacaatgtatctcctggggtacatccccaaggacaacagg
ctgtatttgggcgataaagagctgaacattgttagttactccctgctggtctcagtgctt
gaatatcaaaccgctgtgatgaggagagatttcggcatggctgacaaagttcttcccaca
atcccaaaagaacagagaaccagggtcgcacattttcttgaaaaacagggcttcaaacaa
caagctcttgcagtatctacagatccagagcatcgttttgaacttgctcttcaacttgga
gaattaaaaatagcctatcagcttgcagtggaagcagagtcagaacagaagtggaagcag
cttgcagagcttgccatcagtaaatgccagtttggcttagcccaggagtgtctccaccat
gcccaagactacggagggctgctgctccttgccacagcttcagggaatgccagcatggtg
aacaagttggccgaaggtgcagaaaaagatggcaagaataatgtggcatttatgagctac
ttcctgcagggaaagcttgattcctgtttggagctcctgatcaaaactgggcgtctccct
gaagctgctttccttgcacggacgtatttgccgagccaggtttcaagggttgttaaactc
tggcgggagaacctctctaaagtcaatcaaaaggctgccgagtcccttgctgatcctaca
gaatatgaaaatcttttccctggattaaaggaagcttttgttgctgaagagtacgttaag
caaagtcttgctgacttgagaccagccagggaatatccccttgtcactccaaatgaagaa
agaaacttacttgaagaagcaaaaggattcgagccctctggaataatgacatctcagaaa
aaggctgaagaaccagttccctctcctaaacaggaagtgatgaagacagttgtgcagaat
tctgataacctgccagcaagagatcaaaagacactgctggacctggaagatgacttagac
aacttggatctggaggatattgataccacagatatcaatctggatgaagagatcttagat
gagtga
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integrated database retrieval system
